Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.65■□□□□ 0.26
PTP4A1Q93096 AP002982.1-201ENST00000492365 877 ntBASIC16.65■□□□□ 0.26
PTP4A1Q93096 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTP4A1Q93096 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.65■□□□□ 0.26
PTP4A1Q93096 CKBP1-201ENST00000565489 1086 ntBASIC16.65■□□□□ 0.26
PTP4A1Q93096 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PTP4A1Q93096 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.65■□□□□ 0.26
PTP4A1Q93096 AC130371.2-201ENST00000619443 611 ntBASIC16.65■□□□□ 0.26
PTP4A1Q93096 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.65■□□□□ 0.26
PTP4A1Q93096 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTP4A1Q93096 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTP4A1Q93096 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.65■□□□□ 0.26
PTP4A1Q93096 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTP4A1Q93096 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTP4A1Q93096 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.65■□□□□ 0.26
PTP4A1Q93096 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PTP4A1Q93096 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
PTP4A1Q93096 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
PTP4A1Q93096 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
PTP4A1Q93096 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PTP4A1Q93096 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PTP4A1Q93096 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.64■□□□□ 0.25
PTP4A1Q93096 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
PTP4A1Q93096 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTP4A1Q93096 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTP4A1Q93096 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTP4A1Q93096 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTP4A1Q93096 AC138028.4-201ENST00000564984 1845 ntBASIC16.64■□□□□ 0.25
PTP4A1Q93096 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTP4A1Q93096 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTP4A1Q93096 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTP4A1Q93096 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTP4A1Q93096 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTP4A1Q93096 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PTP4A1Q93096 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTP4A1Q93096 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.64■□□□□ 0.25
PTP4A1Q93096 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PTP4A1Q93096 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTP4A1Q93096 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.64■□□□□ 0.25
PTP4A1Q93096 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
PTP4A1Q93096 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.64■□□□□ 0.25
PTP4A1Q93096 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.64■□□□□ 0.25
PTP4A1Q93096 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PTP4A1Q93096 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.64■□□□□ 0.25
PTP4A1Q93096 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.64■□□□□ 0.25
PTP4A1Q93096 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.64■□□□□ 0.25
PTP4A1Q93096 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTP4A1Q93096 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTP4A1Q93096 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.64■□□□□ 0.25
PTP4A1Q93096 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTP4A1Q93096 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTP4A1Q93096 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.64■□□□□ 0.25
PTP4A1Q93096 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.64■□□□□ 0.25
PTP4A1Q93096 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
PTP4A1Q93096 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTP4A1Q93096 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTP4A1Q93096 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTP4A1Q93096 AC106820.2-201ENST00000563775 3264 ntBASIC16.64■□□□□ 0.25
PTP4A1Q93096 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTP4A1Q93096 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.63■□□□□ 0.25
PTP4A1Q93096 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.63■□□□□ 0.25
PTP4A1Q93096 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTP4A1Q93096 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTP4A1Q93096 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.63■□□□□ 0.25
PTP4A1Q93096 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.63■□□□□ 0.25
PTP4A1Q93096 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTP4A1Q93096 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTP4A1Q93096 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.63■□□□□ 0.25
PTP4A1Q93096 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.63■□□□□ 0.25
PTP4A1Q93096 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTP4A1Q93096 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTP4A1Q93096 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTP4A1Q93096 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTP4A1Q93096 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.63■□□□□ 0.25
PTP4A1Q93096 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.63■□□□□ 0.25
PTP4A1Q93096 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTP4A1Q93096 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PTP4A1Q93096 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.63■□□□□ 0.25
PTP4A1Q93096 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTP4A1Q93096 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTP4A1Q93096 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.63■□□□□ 0.25
PTP4A1Q93096 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.63■□□□□ 0.25
PTP4A1Q93096 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.63■□□□□ 0.25
PTP4A1Q93096 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
PTP4A1Q93096 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTP4A1Q93096 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTP4A1Q93096 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTP4A1Q93096 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.62■□□□□ 0.25
PTP4A1Q93096 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTP4A1Q93096 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTP4A1Q93096 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTP4A1Q93096 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.62■□□□□ 0.25
PTP4A1Q93096 AC134043.2-201ENST00000624206 2238 ntBASIC16.62■□□□□ 0.25
PTP4A1Q93096 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTP4A1Q93096 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PTP4A1Q93096 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
PTP4A1Q93096 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PTP4A1Q93096 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTP4A1Q93096 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PTP4A1Q93096 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms