Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A3Q93084 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A3Q93084 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A3Q93084 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A3Q93084 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
ATP2A3Q93084 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A3Q93084 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A3Q93084 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A3Q93084 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.48■□□□□ 0.71
ATP2A3Q93084 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A3Q93084 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.48■□□□□ 0.71
ATP2A3Q93084 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.48■□□□□ 0.71
ATP2A3Q93084 AC034232.1-201ENST00000506026 1064 ntBASIC19.48■□□□□ 0.71
ATP2A3Q93084 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ATP2A3Q93084 AC069148.1-201ENST00000608741 768 ntBASIC19.48■□□□□ 0.71
ATP2A3Q93084 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.48■□□□□ 0.71
ATP2A3Q93084 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
ATP2A3Q93084 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A3Q93084 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A3Q93084 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A3Q93084 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A3Q93084 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A3Q93084 GPAT2P1-201ENST00000444924 1672 ntBASIC19.48■□□□□ 0.71
ATP2A3Q93084 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.48■□□□□ 0.71
ATP2A3Q93084 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
ATP2A3Q93084 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A3Q93084 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A3Q93084 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A3Q93084 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.48■□□□□ 0.71
ATP2A3Q93084 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.48■□□□□ 0.71
ATP2A3Q93084 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A3Q93084 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A3Q93084 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A3Q93084 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A3Q93084 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A3Q93084 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.48■□□□□ 0.71
ATP2A3Q93084 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A3Q93084 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
ATP2A3Q93084 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A3Q93084 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A3Q93084 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ATP2A3Q93084 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A3Q93084 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A3Q93084 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.47■□□□□ 0.71
ATP2A3Q93084 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A3Q93084 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.47■□□□□ 0.71
ATP2A3Q93084 SPDYE15P-201ENST00000424157 909 ntBASIC19.47■□□□□ 0.71
ATP2A3Q93084 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A3Q93084 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.47■□□□□ 0.71
ATP2A3Q93084 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.47■□□□□ 0.71
ATP2A3Q93084 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.47■□□□□ 0.71
ATP2A3Q93084 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A3Q93084 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.47■□□□□ 0.71
ATP2A3Q93084 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.47■□□□□ 0.71
ATP2A3Q93084 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.47■□□□□ 0.71
ATP2A3Q93084 HYMAI.1-201ENST00000620949 238 ntBASIC19.47■□□□□ 0.71
ATP2A3Q93084 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A3Q93084 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A3Q93084 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A3Q93084 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
ATP2A3Q93084 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A3Q93084 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A3Q93084 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.47■□□□□ 0.71
ATP2A3Q93084 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A3Q93084 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A3Q93084 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A3Q93084 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2A3Q93084 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.46■□□□□ 0.71
ATP2A3Q93084 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.46■□□□□ 0.71
ATP2A3Q93084 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2A3Q93084 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ATP2A3Q93084 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
ATP2A3Q93084 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.46■□□□□ 0.71
ATP2A3Q93084 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2A3Q93084 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.46■□□□□ 0.71
ATP2A3Q93084 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.46■□□□□ 0.71
ATP2A3Q93084 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2A3Q93084 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.46■□□□□ 0.71
ATP2A3Q93084 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2A3Q93084 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2A3Q93084 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2A3Q93084 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.46■□□□□ 0.71
ATP2A3Q93084 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
ATP2A3Q93084 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2A3Q93084 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.46■□□□□ 0.71
ATP2A3Q93084 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2A3Q93084 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ATP2A3Q93084 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2A3Q93084 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
ATP2A3Q93084 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.46■□□□□ 0.71
ATP2A3Q93084 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2A3Q93084 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2A3Q93084 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.46■□□□□ 0.71
ATP2A3Q93084 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2A3Q93084 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
ATP2A3Q93084 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
ATP2A3Q93084 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ATP2A3Q93084 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
ATP2A3Q93084 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ATP2A3Q93084 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms