Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC24.24■■□□□ 1.47
RAPGEF4Q8WZA2 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
RAPGEF4Q8WZA2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
RAPGEF4Q8WZA2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC24.24■■□□□ 1.47
RAPGEF4Q8WZA2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RAPGEF4Q8WZA2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC24.24■■□□□ 1.47
RAPGEF4Q8WZA2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC24.24■■□□□ 1.47
RAPGEF4Q8WZA2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
RAPGEF4Q8WZA2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RAPGEF4Q8WZA2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RAPGEF4Q8WZA2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
RAPGEF4Q8WZA2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RAPGEF4Q8WZA2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC24.23■■□□□ 1.47
RAPGEF4Q8WZA2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC24.23■■□□□ 1.47
RAPGEF4Q8WZA2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RAPGEF4Q8WZA2 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RAPGEF4Q8WZA2 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RAPGEF4Q8WZA2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC24.23■■□□□ 1.47
RAPGEF4Q8WZA2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
RAPGEF4Q8WZA2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC24.23■■□□□ 1.47
RAPGEF4Q8WZA2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
RAPGEF4Q8WZA2 AL591684.3-201ENST00000605187 298 ntBASIC24.23■■□□□ 1.47
RAPGEF4Q8WZA2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
RAPGEF4Q8WZA2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RAPGEF4Q8WZA2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC24.23■■□□□ 1.47
RAPGEF4Q8WZA2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC24.23■■□□□ 1.47
RAPGEF4Q8WZA2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC24.23■■□□□ 1.47
RAPGEF4Q8WZA2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RAPGEF4Q8WZA2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC24.23■■□□□ 1.47
RAPGEF4Q8WZA2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RAPGEF4Q8WZA2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC24.22■■□□□ 1.47
RAPGEF4Q8WZA2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
RAPGEF4Q8WZA2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
RAPGEF4Q8WZA2 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RAPGEF4Q8WZA2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
RAPGEF4Q8WZA2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
RAPGEF4Q8WZA2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RAPGEF4Q8WZA2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC24.22■■□□□ 1.47
RAPGEF4Q8WZA2 MOK-208ENST00000519058 917 ntTSL 2 BASIC24.22■■□□□ 1.47
RAPGEF4Q8WZA2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC24.22■■□□□ 1.47
RAPGEF4Q8WZA2 AC006538.3-201ENST00000612495 578 ntBASIC24.22■■□□□ 1.47
RAPGEF4Q8WZA2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC24.22■■□□□ 1.47
RAPGEF4Q8WZA2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC24.22■■□□□ 1.47
RAPGEF4Q8WZA2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RAPGEF4Q8WZA2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RAPGEF4Q8WZA2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RAPGEF4Q8WZA2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
RAPGEF4Q8WZA2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RAPGEF4Q8WZA2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC24.21■■□□□ 1.47
RAPGEF4Q8WZA2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC24.21■■□□□ 1.47
RAPGEF4Q8WZA2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC24.21■■□□□ 1.47
RAPGEF4Q8WZA2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
RAPGEF4Q8WZA2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
RAPGEF4Q8WZA2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RAPGEF4Q8WZA2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RAPGEF4Q8WZA2 AC096582.2-201ENST00000510860 516 ntBASIC24.21■■□□□ 1.47
RAPGEF4Q8WZA2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC24.21■■□□□ 1.47
RAPGEF4Q8WZA2 AP001005.1-201ENST00000571755 1248 ntBASIC24.21■■□□□ 1.47
RAPGEF4Q8WZA2 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC24.21■■□□□ 1.47
RAPGEF4Q8WZA2 MIR5100-201ENST00000579544 119 ntBASIC24.21■■□□□ 1.47
RAPGEF4Q8WZA2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
RAPGEF4Q8WZA2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
RAPGEF4Q8WZA2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC24.21■■□□□ 1.47
RAPGEF4Q8WZA2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
RAPGEF4Q8WZA2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RAPGEF4Q8WZA2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
RAPGEF4Q8WZA2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RAPGEF4Q8WZA2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC24.21■■□□□ 1.47
RAPGEF4Q8WZA2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RAPGEF4Q8WZA2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
RAPGEF4Q8WZA2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RAPGEF4Q8WZA2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RAPGEF4Q8WZA2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RAPGEF4Q8WZA2 MIR149-201ENST00000384879 89 ntBASIC24.2■■□□□ 1.46
RAPGEF4Q8WZA2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC24.2■■□□□ 1.46
RAPGEF4Q8WZA2 FAM197Y8-203ENST00000450145 560 ntBASIC24.2■■□□□ 1.46
RAPGEF4Q8WZA2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC24.2■■□□□ 1.46
RAPGEF4Q8WZA2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RAPGEF4Q8WZA2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RAPGEF4Q8WZA2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RAPGEF4Q8WZA2 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RAPGEF4Q8WZA2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RAPGEF4Q8WZA2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC24.2■■□□□ 1.46
RAPGEF4Q8WZA2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
RAPGEF4Q8WZA2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC24.2■■□□□ 1.46
RAPGEF4Q8WZA2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC24.19■■□□□ 1.46
RAPGEF4Q8WZA2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RAPGEF4Q8WZA2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
RAPGEF4Q8WZA2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC24.19■■□□□ 1.46
RAPGEF4Q8WZA2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RAPGEF4Q8WZA2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
RAPGEF4Q8WZA2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC24.19■■□□□ 1.46
RAPGEF4Q8WZA2 RNA5SP419-201ENST00000515908 135 ntBASIC24.19■■□□□ 1.46
RAPGEF4Q8WZA2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC24.19■■□□□ 1.46
RAPGEF4Q8WZA2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC24.19■■□□□ 1.46
RAPGEF4Q8WZA2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC24.19■■□□□ 1.46
RAPGEF4Q8WZA2 AL773604.1-201ENST00000617417 272 ntBASIC24.19■■□□□ 1.46
RAPGEF4Q8WZA2 AC114341.1-201ENST00000618070 349 ntBASIC24.19■■□□□ 1.46
RAPGEF4Q8WZA2 ANKRD20A8P-203ENST00000641373 517 ntBASIC24.19■■□□□ 1.46
RAPGEF4Q8WZA2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC24.19■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms