Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC44A1Q8WWI5 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.57■□□□□ 0.56
SLC44A1Q8WWI5 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC44A1Q8WWI5 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC44A1Q8WWI5 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC44A1Q8WWI5 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC44A1Q8WWI5 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC44A1Q8WWI5 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC44A1Q8WWI5 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC44A1Q8WWI5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
SLC44A1Q8WWI5 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SLC44A1Q8WWI5 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC44A1Q8WWI5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
SLC44A1Q8WWI5 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.57■□□□□ 0.56
SLC44A1Q8WWI5 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SLC44A1Q8WWI5 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.57■□□□□ 0.56
SLC44A1Q8WWI5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.57■□□□□ 0.56
SLC44A1Q8WWI5 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC44A1Q8WWI5 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC44A1Q8WWI5 KRT16P1-201ENST00000399124 1418 ntBASIC18.57■□□□□ 0.56
SLC44A1Q8WWI5 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC44A1Q8WWI5 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC44A1Q8WWI5 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 AP000593.1-201ENST00000393668 712 ntBASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 AC130371.2-201ENST00000619443 611 ntBASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC44A1Q8WWI5 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 AL031985.4-201ENST00000642138 673 ntBASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 AL096828.2-201ENST00000567259 1965 ntBASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC44A1Q8WWI5 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms