Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.95■■□□□ 1.1
SH3RF3Q8TEJ3 AC090616.6-201ENST00000582640 721 ntBASIC21.95■■□□□ 1.1
SH3RF3Q8TEJ3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SH3RF3Q8TEJ3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.95■■□□□ 1.1
SH3RF3Q8TEJ3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SH3RF3Q8TEJ3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SH3RF3Q8TEJ3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SH3RF3Q8TEJ3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
SH3RF3Q8TEJ3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
SH3RF3Q8TEJ3 MYLKP1-201ENST00000509077 1580 ntBASIC21.95■■□□□ 1.1
SH3RF3Q8TEJ3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SH3RF3Q8TEJ3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF3Q8TEJ3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF3Q8TEJ3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SH3RF3Q8TEJ3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SH3RF3Q8TEJ3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SH3RF3Q8TEJ3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
SH3RF3Q8TEJ3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.94■■□□□ 1.1
SH3RF3Q8TEJ3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF3Q8TEJ3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF3Q8TEJ3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.94■■□□□ 1.1
SH3RF3Q8TEJ3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF3Q8TEJ3 UNC93B7-201ENST00000509439 705 ntBASIC21.94■■□□□ 1.1
SH3RF3Q8TEJ3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.94■■□□□ 1.1
SH3RF3Q8TEJ3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.94■■□□□ 1.1
SH3RF3Q8TEJ3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SH3RF3Q8TEJ3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF3Q8TEJ3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF3Q8TEJ3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF3Q8TEJ3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SH3RF3Q8TEJ3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF3Q8TEJ3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.94■■□□□ 1.1
SH3RF3Q8TEJ3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF3Q8TEJ3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF3Q8TEJ3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SH3RF3Q8TEJ3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.93■■□□□ 1.1
SH3RF3Q8TEJ3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SH3RF3Q8TEJ3 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.93■■□□□ 1.1
SH3RF3Q8TEJ3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
SH3RF3Q8TEJ3 AL353692.3-201ENST00000407031 1396 ntBASIC21.93■■□□□ 1.1
SH3RF3Q8TEJ3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SH3RF3Q8TEJ3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.93■■□□□ 1.1
SH3RF3Q8TEJ3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.93■■□□□ 1.1
SH3RF3Q8TEJ3 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.93■■□□□ 1.1
SH3RF3Q8TEJ3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.93■■□□□ 1.1
SH3RF3Q8TEJ3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.93■■□□□ 1.1
SH3RF3Q8TEJ3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SH3RF3Q8TEJ3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
SH3RF3Q8TEJ3 KRT89P-201ENST00000620027 1478 ntBASIC21.93■■□□□ 1.1
SH3RF3Q8TEJ3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
SH3RF3Q8TEJ3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SH3RF3Q8TEJ3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SH3RF3Q8TEJ3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SH3RF3Q8TEJ3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF3Q8TEJ3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
SH3RF3Q8TEJ3 SDHAP2-201ENST00000455183 2001 ntBASIC21.92■■□□□ 1.1
SH3RF3Q8TEJ3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF3Q8TEJ3 AC009102.3-201ENST00000623118 1491 ntBASIC21.92■■□□□ 1.1
SH3RF3Q8TEJ3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF3Q8TEJ3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF3Q8TEJ3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF3Q8TEJ3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.92■■□□□ 1.1
SH3RF3Q8TEJ3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF3Q8TEJ3 AL592071.1-201ENST00000611956 408 ntBASIC21.92■■□□□ 1.1
SH3RF3Q8TEJ3 AC004263.2-201ENST00000617183 678 ntBASIC21.92■■□□□ 1.1
SH3RF3Q8TEJ3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SH3RF3Q8TEJ3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF3Q8TEJ3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF3Q8TEJ3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF3Q8TEJ3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF3Q8TEJ3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF3Q8TEJ3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.92■■□□□ 1.1
SH3RF3Q8TEJ3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SH3RF3Q8TEJ3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.91■■□□□ 1.1
SH3RF3Q8TEJ3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3RF3Q8TEJ3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.91■■□□□ 1.1
SH3RF3Q8TEJ3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.91■■□□□ 1.1
SH3RF3Q8TEJ3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.91■■□□□ 1.1
SH3RF3Q8TEJ3 RN7SL606P-201ENST00000472779 293 ntBASIC21.91■■□□□ 1.1
SH3RF3Q8TEJ3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.91■■□□□ 1.1
SH3RF3Q8TEJ3 AC124864.1-201ENST00000623408 392 ntBASIC21.91■■□□□ 1.1
SH3RF3Q8TEJ3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SH3RF3Q8TEJ3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3RF3Q8TEJ3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3RF3Q8TEJ3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.91■■□□□ 1.1
SH3RF3Q8TEJ3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3RF3Q8TEJ3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3RF3Q8TEJ3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3RF3Q8TEJ3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.9■■□□□ 1.1
SH3RF3Q8TEJ3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SH3RF3Q8TEJ3 AC112777.1-201ENST00000540175 1423 ntBASIC21.9■■□□□ 1.1
SH3RF3Q8TEJ3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SH3RF3Q8TEJ3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.9■■□□□ 1.1
SH3RF3Q8TEJ3 NUS1P1-201ENST00000446295 882 ntBASIC21.9■■□□□ 1.1
SH3RF3Q8TEJ3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SH3RF3Q8TEJ3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SH3RF3Q8TEJ3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SH3RF3Q8TEJ3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.9■■□□□ 1.1
SH3RF3Q8TEJ3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.9■■□□□ 1.1
SH3RF3Q8TEJ3 AL732292.2-201ENST00000609649 430 ntBASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms