Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 AC004408.2-201ENST00000623613 2777 ntBASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 Z83836.1-201ENST00000624605 1642 ntBASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 RNF165-205ENST00000588679 2904 ntBASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH3RF2Q8TEC5 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 AP003733.1-201ENST00000491725 852 ntBASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 PRELID1P1-202ENST00000567272 903 ntBASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 KRT18P1-202ENST00000452408 1331 ntBASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 TNXA-203ENST00000507684 2038 ntBASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.17■□□□□ 0.66
SH3RF2Q8TEC5 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 AL161938.1-201ENST00000569833 2180 ntBASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 MTMR9LP-203ENST00000426597 1545 ntBASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 AC005332.3-201ENST00000589904 676 ntBASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH3RF2Q8TEC5 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 BX323043.1-201ENST00000641006 1765 ntBASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms