Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 CHCHD2P8-201ENST00000429873 447 ntBASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 AC007613.1-201ENST00000572811 2597 ntBASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 AC141586.3-201ENST00000562166 1838 ntBASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 FP475955.4-201ENST00000623131 1990 ntBASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.42■□□□□ 0.7
SHKBP1Q8TBC3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHKBP1Q8TBC3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.42■□□□□ 0.7
SHKBP1Q8TBC3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.42■□□□□ 0.7
SHKBP1Q8TBC3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHKBP1Q8TBC3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SHKBP1Q8TBC3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.42■□□□□ 0.7
SHKBP1Q8TBC3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.42■□□□□ 0.7
SHKBP1Q8TBC3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.42■□□□□ 0.7
SHKBP1Q8TBC3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHKBP1Q8TBC3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.42■□□□□ 0.7
SHKBP1Q8TBC3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHKBP1Q8TBC3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.42■□□□□ 0.7
SHKBP1Q8TBC3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SHKBP1Q8TBC3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SHKBP1Q8TBC3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHKBP1Q8TBC3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SHKBP1Q8TBC3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.42■□□□□ 0.7
SHKBP1Q8TBC3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHKBP1Q8TBC3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SHKBP1Q8TBC3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHKBP1Q8TBC3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SHKBP1Q8TBC3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHKBP1Q8TBC3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.42■□□□□ 0.7
SHKBP1Q8TBC3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHKBP1Q8TBC3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SHKBP1Q8TBC3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHKBP1Q8TBC3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.41■□□□□ 0.7
SHKBP1Q8TBC3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHKBP1Q8TBC3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SHKBP1Q8TBC3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHKBP1Q8TBC3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SHKBP1Q8TBC3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHKBP1Q8TBC3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SHKBP1Q8TBC3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHKBP1Q8TBC3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHKBP1Q8TBC3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHKBP1Q8TBC3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHKBP1Q8TBC3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SHKBP1Q8TBC3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.41■□□□□ 0.7
SHKBP1Q8TBC3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.41■□□□□ 0.7
SHKBP1Q8TBC3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
SHKBP1Q8TBC3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SHKBP1Q8TBC3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.41■□□□□ 0.7
SHKBP1Q8TBC3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.41■□□□□ 0.7
SHKBP1Q8TBC3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHKBP1Q8TBC3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHKBP1Q8TBC3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SHKBP1Q8TBC3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.41■□□□□ 0.7
SHKBP1Q8TBC3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHKBP1Q8TBC3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SHKBP1Q8TBC3 AC006333.2-201ENST00000607957 2099 ntBASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 AC034236.2-201ENST00000606662 1610 ntBASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 KRT18P1-202ENST00000452408 1331 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms