Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.01■□□□□ 0.31
SETD9Q8NE22 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SETD9Q8NE22 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17■□□□□ 0.31
SETD9Q8NE22 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SETD9Q8NE22 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
SETD9Q8NE22 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17■□□□□ 0.31
SETD9Q8NE22 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17■□□□□ 0.31
SETD9Q8NE22 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17■□□□□ 0.31
SETD9Q8NE22 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SETD9Q8NE22 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17■□□□□ 0.31
SETD9Q8NE22 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SETD9Q8NE22 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17■□□□□ 0.31
SETD9Q8NE22 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SETD9Q8NE22 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SETD9Q8NE22 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17■□□□□ 0.31
SETD9Q8NE22 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SETD9Q8NE22 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SETD9Q8NE22 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17■□□□□ 0.31
SETD9Q8NE22 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SETD9Q8NE22 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SETD9Q8NE22 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17■□□□□ 0.31
SETD9Q8NE22 AC016769.1-201ENST00000409132 1010 ntBASIC17■□□□□ 0.31
SETD9Q8NE22 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17■□□□□ 0.31
SETD9Q8NE22 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17■□□□□ 0.31
SETD9Q8NE22 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17■□□□□ 0.31
SETD9Q8NE22 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17■□□□□ 0.31
SETD9Q8NE22 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17■□□□□ 0.31
SETD9Q8NE22 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17■□□□□ 0.31
SETD9Q8NE22 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SETD9Q8NE22 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17■□□□□ 0.31
SETD9Q8NE22 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SETD9Q8NE22 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SETD9Q8NE22 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SETD9Q8NE22 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SETD9Q8NE22 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SETD9Q8NE22 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
SETD9Q8NE22 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SETD9Q8NE22 AC108860.2-201ENST00000562760 2183 ntBASIC16.99■□□□□ 0.31
SETD9Q8NE22 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SETD9Q8NE22 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.99■□□□□ 0.31
SETD9Q8NE22 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SETD9Q8NE22 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.99■□□□□ 0.31
SETD9Q8NE22 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.99■□□□□ 0.31
SETD9Q8NE22 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SETD9Q8NE22 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SETD9Q8NE22 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SETD9Q8NE22 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SETD9Q8NE22 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SETD9Q8NE22 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.99■□□□□ 0.31
SETD9Q8NE22 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SETD9Q8NE22 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.99■□□□□ 0.31
SETD9Q8NE22 AL160286.2-201ENST00000567150 934 ntBASIC16.99■□□□□ 0.31
SETD9Q8NE22 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.99■□□□□ 0.31
SETD9Q8NE22 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.99■□□□□ 0.31
SETD9Q8NE22 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.99■□□□□ 0.31
SETD9Q8NE22 AC006557.6-201ENST00000623071 864 ntBASIC16.99■□□□□ 0.31
SETD9Q8NE22 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SETD9Q8NE22 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SETD9Q8NE22 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SETD9Q8NE22 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.99■□□□□ 0.31
SETD9Q8NE22 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
SETD9Q8NE22 AD000864.1-201ENST00000624076 2295 ntBASIC16.99■□□□□ 0.31
SETD9Q8NE22 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SETD9Q8NE22 AC106820.2-201ENST00000563775 3264 ntBASIC16.99■□□□□ 0.31
SETD9Q8NE22 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SETD9Q8NE22 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.99■□□□□ 0.31
SETD9Q8NE22 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
SETD9Q8NE22 AC084018.2-201ENST00000613093 2607 ntBASIC16.99■□□□□ 0.31
SETD9Q8NE22 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SETD9Q8NE22 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SETD9Q8NE22 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SETD9Q8NE22 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SETD9Q8NE22 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SETD9Q8NE22 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SETD9Q8NE22 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SETD9Q8NE22 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SETD9Q8NE22 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SETD9Q8NE22 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SETD9Q8NE22 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.98■□□□□ 0.31
SETD9Q8NE22 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
SETD9Q8NE22 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SETD9Q8NE22 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.98■□□□□ 0.31
SETD9Q8NE22 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.98■□□□□ 0.31
SETD9Q8NE22 AC011767.1-201ENST00000617410 1153 ntBASIC16.98■□□□□ 0.31
SETD9Q8NE22 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.98■□□□□ 0.31
SETD9Q8NE22 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.98■□□□□ 0.31
SETD9Q8NE22 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SETD9Q8NE22 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SETD9Q8NE22 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SETD9Q8NE22 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SETD9Q8NE22 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.98■□□□□ 0.31
SETD9Q8NE22 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SETD9Q8NE22 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.98■□□□□ 0.31
SETD9Q8NE22 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SETD9Q8NE22 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
SETD9Q8NE22 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SETD9Q8NE22 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SETD9Q8NE22 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.98■□□□□ 0.31
SETD9Q8NE22 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SETD9Q8NE22 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms