Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.69■□□□□ 0.42
ZNF248Q8NDW4 AC074051.2-201ENST00000565115 352 ntBASIC17.69■□□□□ 0.42
ZNF248Q8NDW4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.69■□□□□ 0.42
ZNF248Q8NDW4 AC064862.7-201ENST00000604520 867 ntBASIC17.69■□□□□ 0.42
ZNF248Q8NDW4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF248Q8NDW4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF248Q8NDW4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF248Q8NDW4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ZNF248Q8NDW4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF248Q8NDW4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF248Q8NDW4 HLA-A-201ENST00000376802 1334 ntBASIC17.69■□□□□ 0.42
ZNF248Q8NDW4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF248Q8NDW4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ZNF248Q8NDW4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.69■□□□□ 0.42
ZNF248Q8NDW4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 KRT16P4-201ENST00000453883 522 ntBASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 RNF126P1-202ENST00000569893 925 ntBASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.68■□□□□ 0.42
ZNF248Q8NDW4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 AL158211.5-201ENST00000623583 2518 ntBASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 Z69720.1-201ENST00000601483 472 ntBASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 IGHV3-41-201ENST00000613121 348 ntBASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF248Q8NDW4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 Z83836.1-201ENST00000624605 1642 ntBASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 AC099336.1-202ENST00000602961 463 ntBASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 AL671883.3-201ENST00000603274 991 ntBASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms