Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.88■□□□□ 0.61
DNAAF3Q8N9W5 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.88■□□□□ 0.61
DNAAF3Q8N9W5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
DNAAF3Q8N9W5 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DNAAF3Q8N9W5 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
DNAAF3Q8N9W5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.88■□□□□ 0.61
DNAAF3Q8N9W5 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.88■□□□□ 0.61
DNAAF3Q8N9W5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
DNAAF3Q8N9W5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.88■□□□□ 0.61
DNAAF3Q8N9W5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DNAAF3Q8N9W5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.88■□□□□ 0.61
DNAAF3Q8N9W5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DNAAF3Q8N9W5 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DNAAF3Q8N9W5 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNAAF3Q8N9W5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DNAAF3Q8N9W5 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNAAF3Q8N9W5 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
DNAAF3Q8N9W5 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNAAF3Q8N9W5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DNAAF3Q8N9W5 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNAAF3Q8N9W5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
DNAAF3Q8N9W5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
DNAAF3Q8N9W5 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.87■□□□□ 0.61
DNAAF3Q8N9W5 MCCD1P1-208ENST00000445732 328 ntBASIC18.87■□□□□ 0.61
DNAAF3Q8N9W5 CA15P1-201ENST00000481698 905 ntBASIC18.87■□□□□ 0.61
DNAAF3Q8N9W5 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.87■□□□□ 0.61
DNAAF3Q8N9W5 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DNAAF3Q8N9W5 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.87■□□□□ 0.61
DNAAF3Q8N9W5 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNAAF3Q8N9W5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.87■□□□□ 0.61
DNAAF3Q8N9W5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.87■□□□□ 0.61
DNAAF3Q8N9W5 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNAAF3Q8N9W5 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
DNAAF3Q8N9W5 AP006294.2-201ENST00000641667 209 ntBASIC18.87■□□□□ 0.61
DNAAF3Q8N9W5 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
DNAAF3Q8N9W5 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNAAF3Q8N9W5 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNAAF3Q8N9W5 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 GPAT2P1-201ENST00000444924 1672 ntBASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 KRT8P45-201ENST00000414328 1447 ntBASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 UNC93B2-201ENST00000285383 730 ntBASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 AL023284.2-201ENST00000405850 579 ntBASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 TSPY7P-201ENST00000431358 1114 ntBASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 MIR4785-201ENST00000585005 73 ntBASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF3Q8N9W5 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 AC079598.2-202ENST00000546624 1451 ntBASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 AC018470.1-201ENST00000624790 3129 ntBASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms