Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC155Q8N6L0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC155Q8N6L0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC155Q8N6L0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCDC155Q8N6L0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC155Q8N6L0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC155Q8N6L0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC155Q8N6L0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC155Q8N6L0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 CROCCP3-202ENST00000420820 1947 ntBASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC155Q8N6L0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC155Q8N6L0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC155Q8N6L0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC155Q8N6L0 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.93■□□□□ 0.94
CCDC155Q8N6L0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC155Q8N6L0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC155Q8N6L0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC155Q8N6L0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC155Q8N6L0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC155Q8N6L0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC155Q8N6L0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.93■□□□□ 0.94
CCDC155Q8N6L0 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC155Q8N6L0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
CCDC155Q8N6L0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CCDC155Q8N6L0 RASA4DP-201ENST00000460726 1199 ntBASIC20.93■□□□□ 0.94
CCDC155Q8N6L0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC155Q8N6L0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC155Q8N6L0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CCDC155Q8N6L0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC155Q8N6L0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC155Q8N6L0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC155Q8N6L0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC155Q8N6L0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCDC155Q8N6L0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CCDC155Q8N6L0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC155Q8N6L0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC155Q8N6L0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC155Q8N6L0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC155Q8N6L0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CCDC155Q8N6L0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC155Q8N6L0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC155Q8N6L0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms