Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SCML4Q8N228 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.21■□□□□ 0.67
SCML4Q8N228 VENTXP5-201ENST00000523979 775 ntBASIC19.21■□□□□ 0.67
SCML4Q8N228 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.21■□□□□ 0.67
SCML4Q8N228 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.21■□□□□ 0.67
SCML4Q8N228 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.21■□□□□ 0.67
SCML4Q8N228 AC024563.2-201ENST00000603282 481 ntBASIC19.21■□□□□ 0.67
SCML4Q8N228 AL024508.2-201ENST00000607749 1894 ntBASIC19.21■□□□□ 0.67
SCML4Q8N228 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCML4Q8N228 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.21■□□□□ 0.67
SCML4Q8N228 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCML4Q8N228 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCML4Q8N228 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
SCML4Q8N228 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCML4Q8N228 AC087289.5-201ENST00000586076 3175 ntBASIC19.2■□□□□ 0.66
SCML4Q8N228 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SCML4Q8N228 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCML4Q8N228 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCML4Q8N228 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SCML4Q8N228 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.2■□□□□ 0.66
SCML4Q8N228 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.2■□□□□ 0.66
SCML4Q8N228 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.2■□□□□ 0.66
SCML4Q8N228 AC113404.2-201ENST00000507884 177 ntBASIC19.2■□□□□ 0.66
SCML4Q8N228 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.2■□□□□ 0.66
SCML4Q8N228 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
SCML4Q8N228 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.2■□□□□ 0.66
SCML4Q8N228 AC116407.4-201ENST00000623319 1061 ntBASIC19.2■□□□□ 0.66
SCML4Q8N228 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.2■□□□□ 0.66
SCML4Q8N228 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCML4Q8N228 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCML4Q8N228 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCML4Q8N228 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.2■□□□□ 0.66
SCML4Q8N228 AC005332.1-201ENST00000577698 1310 ntBASIC19.2■□□□□ 0.66
SCML4Q8N228 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCML4Q8N228 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCML4Q8N228 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCML4Q8N228 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCML4Q8N228 WIZP1-201ENST00000531444 2299 ntBASIC19.2■□□□□ 0.66
SCML4Q8N228 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCML4Q8N228 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCML4Q8N228 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCML4Q8N228 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.19■□□□□ 0.66
SCML4Q8N228 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCML4Q8N228 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SCML4Q8N228 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.19■□□□□ 0.66
SCML4Q8N228 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCML4Q8N228 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.19■□□□□ 0.66
SCML4Q8N228 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCML4Q8N228 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.19■□□□□ 0.66
SCML4Q8N228 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.19■□□□□ 0.66
SCML4Q8N228 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.19■□□□□ 0.66
SCML4Q8N228 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.19■□□□□ 0.66
SCML4Q8N228 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SCML4Q8N228 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SCML4Q8N228 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.19■□□□□ 0.66
SCML4Q8N228 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.19■□□□□ 0.66
SCML4Q8N228 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.19■□□□□ 0.66
SCML4Q8N228 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCML4Q8N228 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.19■□□□□ 0.66
SCML4Q8N228 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCML4Q8N228 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
SCML4Q8N228 AL162741.1-201ENST00000565563 1558 ntBASIC19.19■□□□□ 0.66
SCML4Q8N228 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCML4Q8N228 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCML4Q8N228 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCML4Q8N228 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SCML4Q8N228 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.18■□□□□ 0.66
SCML4Q8N228 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCML4Q8N228 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCML4Q8N228 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCML4Q8N228 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.18■□□□□ 0.66
SCML4Q8N228 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SCML4Q8N228 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SCML4Q8N228 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCML4Q8N228 AL645929.1-201ENST00000420084 975 ntBASIC19.18■□□□□ 0.66
SCML4Q8N228 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.18■□□□□ 0.66
SCML4Q8N228 AC091076.1-201ENST00000610741 619 ntBASIC19.18■□□□□ 0.66
SCML4Q8N228 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCML4Q8N228 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SCML4Q8N228 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCML4Q8N228 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.18■□□□□ 0.66
SCML4Q8N228 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
SCML4Q8N228 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCML4Q8N228 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.17■□□□□ 0.66
SCML4Q8N228 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.17■□□□□ 0.66
SCML4Q8N228 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCML4Q8N228 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCML4Q8N228 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.17■□□□□ 0.66
SCML4Q8N228 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCML4Q8N228 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCML4Q8N228 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCML4Q8N228 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCML4Q8N228 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCML4Q8N228 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCML4Q8N228 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCML4Q8N228 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.17■□□□□ 0.66
SCML4Q8N228 PCED1CP-201ENST00000419887 785 ntBASIC19.17■□□□□ 0.66
SCML4Q8N228 KRT18P48-201ENST00000434763 852 ntBASIC19.17■□□□□ 0.66
SCML4Q8N228 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCML4Q8N228 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms