Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 KRT18P3-201ENST00000451602 1288 ntBASIC27.34■■□□□ 1.97
ABCA6Q8N139 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
ABCA6Q8N139 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
ABCA6Q8N139 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ABCA6Q8N139 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC27.34■■□□□ 1.97
ABCA6Q8N139 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ABCA6Q8N139 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC27.34■■□□□ 1.97
ABCA6Q8N139 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ABCA6Q8N139 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
ABCA6Q8N139 RPS8P6-201ENST00000426177 609 ntBASIC27.34■■□□□ 1.97
ABCA6Q8N139 DNAJB3-201ENST00000446806 729 ntBASIC27.34■■□□□ 1.97
ABCA6Q8N139 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ABCA6Q8N139 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC27.34■■□□□ 1.97
ABCA6Q8N139 RPS29-206ENST00000557111 488 ntTSL 2 BASIC27.34■■□□□ 1.97
ABCA6Q8N139 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC27.34■■□□□ 1.97
ABCA6Q8N139 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC27.34■■□□□ 1.97
ABCA6Q8N139 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ABCA6Q8N139 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ABCA6Q8N139 AL157384.1-201ENST00000445995 2473 ntBASIC27.34■■□□□ 1.97
ABCA6Q8N139 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ABCA6Q8N139 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ABCA6Q8N139 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ABCA6Q8N139 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ABCA6Q8N139 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC27.33■■□□□ 1.97
ABCA6Q8N139 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ABCA6Q8N139 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.97
ABCA6Q8N139 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ABCA6Q8N139 MIR149-201ENST00000384879 89 ntBASIC27.33■■□□□ 1.97
ABCA6Q8N139 KIRREL3-AS3-201ENST00000404882 831 ntBASIC27.33■■□□□ 1.97
ABCA6Q8N139 AP006288.1-201ENST00000446065 395 ntBASIC27.33■■□□□ 1.97
ABCA6Q8N139 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC27.33■■□□□ 1.97
ABCA6Q8N139 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC27.33■■□□□ 1.97
ABCA6Q8N139 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ABCA6Q8N139 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC27.33■■□□□ 1.97
ABCA6Q8N139 AL024508.2-201ENST00000607749 1894 ntBASIC27.33■■□□□ 1.97
ABCA6Q8N139 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
ABCA6Q8N139 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA6Q8N139 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC27.32■■□□□ 1.96
ABCA6Q8N139 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA6Q8N139 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC27.32■■□□□ 1.96
ABCA6Q8N139 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC27.32■■□□□ 1.96
ABCA6Q8N139 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA6Q8N139 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA6Q8N139 AC009533.2-201ENST00000543664 586 ntBASIC27.32■■□□□ 1.96
ABCA6Q8N139 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA6Q8N139 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
ABCA6Q8N139 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA6Q8N139 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA6Q8N139 NFYC-AS1-201ENST00000606277 1687 ntBASIC27.32■■□□□ 1.96
ABCA6Q8N139 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA6Q8N139 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA6Q8N139 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
ABCA6Q8N139 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA6Q8N139 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA6Q8N139 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
ABCA6Q8N139 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
ABCA6Q8N139 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ABCA6Q8N139 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC27.31■■□□□ 1.96
ABCA6Q8N139 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC27.31■■□□□ 1.96
ABCA6Q8N139 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
ABCA6Q8N139 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
ABCA6Q8N139 AL163051.1-201ENST00000569214 1512 ntBASIC27.31■■□□□ 1.96
ABCA6Q8N139 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ABCA6Q8N139 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC27.31■■□□□ 1.96
ABCA6Q8N139 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC27.31■■□□□ 1.96
ABCA6Q8N139 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC27.3■■□□□ 1.96
ABCA6Q8N139 RPS2P28-201ENST00000314255 741 ntBASIC27.3■■□□□ 1.96
ABCA6Q8N139 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ABCA6Q8N139 CENPM-204ENST00000402420 688 ntTSL 5 BASIC27.3■■□□□ 1.96
ABCA6Q8N139 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC27.3■■□□□ 1.96
ABCA6Q8N139 DANCR-204ENST00000444958 709 ntTSL 3 BASIC27.3■■□□□ 1.96
ABCA6Q8N139 ALG1L5P-201ENST00000482043 771 ntBASIC27.3■■□□□ 1.96
ABCA6Q8N139 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC27.3■■□□□ 1.96
ABCA6Q8N139 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC27.3■■□□□ 1.96
ABCA6Q8N139 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ABCA6Q8N139 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC27.3■■□□□ 1.96
ABCA6Q8N139 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC27.3■■□□□ 1.96
ABCA6Q8N139 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ABCA6Q8N139 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ABCA6Q8N139 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC27.3■■□□□ 1.96
ABCA6Q8N139 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ABCA6Q8N139 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC27.3■■□□□ 1.96
ABCA6Q8N139 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ABCA6Q8N139 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC27.3■■□□□ 1.96
ABCA6Q8N139 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC27.3■■□□□ 1.96
ABCA6Q8N139 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC27.3■■□□□ 1.96
ABCA6Q8N139 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC27.3■■□□□ 1.96
ABCA6Q8N139 AC125634.1-201ENST00000438758 1403 ntBASIC27.29■■□□□ 1.96
ABCA6Q8N139 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC27.29■■□□□ 1.96
ABCA6Q8N139 LINC01006-201ENST00000333319 2292 ntBASIC27.29■■□□□ 1.96
ABCA6Q8N139 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
ABCA6Q8N139 PMP22-202ENST00000395936 816 ntTSL 3 BASIC27.29■■□□□ 1.96
ABCA6Q8N139 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC27.29■■□□□ 1.96
ABCA6Q8N139 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC27.29■■□□□ 1.96
ABCA6Q8N139 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC27.29■■□□□ 1.96
ABCA6Q8N139 AC002347.1-201ENST00000569543 541 ntBASIC27.29■■□□□ 1.96
ABCA6Q8N139 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ABCA6Q8N139 AC141586.3-201ENST00000562166 1838 ntBASIC27.29■■□□□ 1.96
ABCA6Q8N139 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
ABCA6Q8N139 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms