Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 AC083880.1-201ENST00000608266 535 ntBASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 KRT8P32-201ENST00000512863 1461 ntBASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TRIM42Q8IWZ5 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
TRIM42Q8IWZ5 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.46■□□□□ 0.54
TRIM42Q8IWZ5 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 RNA5SP413-201ENST00000516373 109 ntBASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 HLA-A-209ENST00000638375 975 ntBASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TRIM42Q8IWZ5 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms