Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AL390719.2-201ENST00000606993 987 ntBASIC20.55■□□□□ 0.88
CCDC60Q8IWA6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC60Q8IWA6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC60Q8IWA6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC60Q8IWA6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC60Q8IWA6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC60Q8IWA6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CCDC60Q8IWA6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC60Q8IWA6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC60Q8IWA6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC60Q8IWA6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.54■□□□□ 0.88
CCDC60Q8IWA6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
CCDC60Q8IWA6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC60Q8IWA6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC60Q8IWA6 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC60Q8IWA6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CCDC60Q8IWA6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC60Q8IWA6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC60Q8IWA6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC60Q8IWA6 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC60Q8IWA6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
CCDC60Q8IWA6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.54■□□□□ 0.88
CCDC60Q8IWA6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.54■□□□□ 0.88
CCDC60Q8IWA6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC60Q8IWA6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC60Q8IWA6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC60Q8IWA6 SDHAP2-201ENST00000455183 2001 ntBASIC20.53■□□□□ 0.88
CCDC60Q8IWA6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC60Q8IWA6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC60Q8IWA6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC60Q8IWA6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CCDC60Q8IWA6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CCDC60Q8IWA6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC60Q8IWA6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC60Q8IWA6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC60Q8IWA6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.53■□□□□ 0.88
CCDC60Q8IWA6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.53■□□□□ 0.88
CCDC60Q8IWA6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CCDC60Q8IWA6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC60Q8IWA6 AC009102.3-201ENST00000623118 1491 ntBASIC20.53■□□□□ 0.88
CCDC60Q8IWA6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC60Q8IWA6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC60Q8IWA6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CCDC60Q8IWA6 AC005082.1-201ENST00000413042 2259 ntBASIC20.53■□□□□ 0.88
CCDC60Q8IWA6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC60Q8IWA6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC60Q8IWA6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC60Q8IWA6 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC60Q8IWA6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC60Q8IWA6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC60Q8IWA6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC60Q8IWA6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC60Q8IWA6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC60Q8IWA6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC60Q8IWA6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC60Q8IWA6 IGHGP-201ENST00000390555 1178 ntBASIC20.52■□□□□ 0.88
CCDC60Q8IWA6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC60Q8IWA6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC60Q8IWA6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC60Q8IWA6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC60Q8IWA6 CHCHD2P8-201ENST00000429873 447 ntBASIC20.52■□□□□ 0.88
CCDC60Q8IWA6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.52■□□□□ 0.88
CCDC60Q8IWA6 DUSP5P1-201ENST00000441325 1139 ntBASIC20.52■□□□□ 0.88
CCDC60Q8IWA6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CCDC60Q8IWA6 AP002414.4-201ENST00000589764 1148 ntBASIC20.52■□□□□ 0.88
CCDC60Q8IWA6 CLEC4GP1-201ENST00000596555 870 ntBASIC20.52■□□□□ 0.88
CCDC60Q8IWA6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CCDC60Q8IWA6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC60Q8IWA6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC60Q8IWA6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC60Q8IWA6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC60Q8IWA6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC60Q8IWA6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC60Q8IWA6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
CCDC60Q8IWA6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC60Q8IWA6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC60Q8IWA6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC60Q8IWA6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC60Q8IWA6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
CCDC60Q8IWA6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC60Q8IWA6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CCDC60Q8IWA6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC60Q8IWA6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC60Q8IWA6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CCDC60Q8IWA6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC60Q8IWA6 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC60Q8IWA6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.51■□□□□ 0.87
CCDC60Q8IWA6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC60Q8IWA6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC60Q8IWA6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
CCDC60Q8IWA6 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.51■□□□□ 0.87
CCDC60Q8IWA6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.51■□□□□ 0.87
CCDC60Q8IWA6 GPR32P1-201ENST00000601788 811 ntBASIC20.51■□□□□ 0.87
CCDC60Q8IWA6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC60Q8IWA6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CCDC60Q8IWA6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC60Q8IWA6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC60Q8IWA6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC60Q8IWA6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC60Q8IWA6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms