Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APLFQ8IW19 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.35■□□□□ 0.53
APLFQ8IW19 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.35■□□□□ 0.53
APLFQ8IW19 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
APLFQ8IW19 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
APLFQ8IW19 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
APLFQ8IW19 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
APLFQ8IW19 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
APLFQ8IW19 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APLFQ8IW19 AC084018.2-201ENST00000613093 2607 ntBASIC18.35■□□□□ 0.53
APLFQ8IW19 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APLFQ8IW19 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.35■□□□□ 0.53
APLFQ8IW19 AL390955.1-201ENST00000428694 934 ntBASIC18.35■□□□□ 0.53
APLFQ8IW19 SLC25A3P1-201ENST00000443844 931 ntBASIC18.35■□□□□ 0.53
APLFQ8IW19 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.35■□□□□ 0.53
APLFQ8IW19 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.35■□□□□ 0.53
APLFQ8IW19 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.35■□□□□ 0.53
APLFQ8IW19 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.35■□□□□ 0.53
APLFQ8IW19 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.35■□□□□ 0.53
APLFQ8IW19 AC026271.3-201ENST00000571884 352 ntBASIC18.35■□□□□ 0.53
APLFQ8IW19 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.35■□□□□ 0.53
APLFQ8IW19 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.35■□□□□ 0.53
APLFQ8IW19 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APLFQ8IW19 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
APLFQ8IW19 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
APLFQ8IW19 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APLFQ8IW19 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APLFQ8IW19 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APLFQ8IW19 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APLFQ8IW19 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APLFQ8IW19 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APLFQ8IW19 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APLFQ8IW19 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.35■□□□□ 0.53
APLFQ8IW19 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APLFQ8IW19 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APLFQ8IW19 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.34■□□□□ 0.53
APLFQ8IW19 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
APLFQ8IW19 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APLFQ8IW19 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
APLFQ8IW19 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APLFQ8IW19 AC093525.10-201ENST00000625130 1569 ntBASIC18.34■□□□□ 0.53
APLFQ8IW19 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APLFQ8IW19 FSCN1P1-201ENST00000568912 1481 ntBASIC18.34■□□□□ 0.53
APLFQ8IW19 KRT8P17-201ENST00000453110 1448 ntBASIC18.34■□□□□ 0.53
APLFQ8IW19 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APLFQ8IW19 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.34■□□□□ 0.53
APLFQ8IW19 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APLFQ8IW19 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
APLFQ8IW19 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.34■□□□□ 0.53
APLFQ8IW19 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APLFQ8IW19 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.34■□□□□ 0.53
APLFQ8IW19 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
APLFQ8IW19 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APLFQ8IW19 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APLFQ8IW19 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APLFQ8IW19 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APLFQ8IW19 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
APLFQ8IW19 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
APLFQ8IW19 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.34■□□□□ 0.53
APLFQ8IW19 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.34■□□□□ 0.53
APLFQ8IW19 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APLFQ8IW19 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.34■□□□□ 0.53
APLFQ8IW19 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
APLFQ8IW19 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
APLFQ8IW19 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.34■□□□□ 0.53
APLFQ8IW19 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
APLFQ8IW19 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
APLFQ8IW19 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
APLFQ8IW19 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
APLFQ8IW19 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
APLFQ8IW19 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
APLFQ8IW19 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
APLFQ8IW19 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
APLFQ8IW19 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
APLFQ8IW19 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.33■□□□□ 0.53
APLFQ8IW19 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
APLFQ8IW19 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
APLFQ8IW19 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
APLFQ8IW19 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.33■□□□□ 0.52
APLFQ8IW19 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
APLFQ8IW19 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APLFQ8IW19 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
APLFQ8IW19 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.33■□□□□ 0.52
APLFQ8IW19 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.33■□□□□ 0.52
APLFQ8IW19 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.33■□□□□ 0.52
APLFQ8IW19 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.33■□□□□ 0.52
APLFQ8IW19 C1QL1P1-201ENST00000568105 661 ntBASIC18.33■□□□□ 0.52
APLFQ8IW19 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.33■□□□□ 0.52
APLFQ8IW19 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
APLFQ8IW19 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APLFQ8IW19 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
APLFQ8IW19 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APLFQ8IW19 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
APLFQ8IW19 AC046158.3-201ENST00000624947 2558 ntBASIC18.33■□□□□ 0.52
APLFQ8IW19 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.33■□□□□ 0.52
APLFQ8IW19 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
APLFQ8IW19 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APLFQ8IW19 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
APLFQ8IW19 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
APLFQ8IW19 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms