Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 TSPY7P-201ENST00000431358 1114 ntBASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 NOC2LP1-202ENST00000452600 2235 ntBASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 SLC25A1P2-201ENST00000430693 912 ntBASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL3Q8IVW4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL3Q8IVW4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL3Q8IVW4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL3Q8IVW4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL3Q8IVW4 AC036111.1-201ENST00000533973 1582 ntBASIC19.02■□□□□ 0.64
CDKL3Q8IVW4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL3Q8IVW4 KRT8P50-201ENST00000562022 1438 ntBASIC19.02■□□□□ 0.64
CDKL3Q8IVW4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL3Q8IVW4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL3Q8IVW4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL3Q8IVW4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL3Q8IVW4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.02■□□□□ 0.64
CDKL3Q8IVW4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL3Q8IVW4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CDKL3Q8IVW4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.02■□□□□ 0.64
CDKL3Q8IVW4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CDKL3Q8IVW4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.02■□□□□ 0.64
CDKL3Q8IVW4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL3Q8IVW4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL3Q8IVW4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL3Q8IVW4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDKL3Q8IVW4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.02■□□□□ 0.63
CDKL3Q8IVW4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.02■□□□□ 0.63
CDKL3Q8IVW4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CDKL3Q8IVW4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 TSPY17P-201ENST00000450329 467 ntBASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 AP000525.1-201ENST00000608286 694 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms