Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 MCRIP2P1-201ENST00000394346 511 ntBASIC15.4■□□□□ 0.06
ZNF546Q86UE3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 AC007322.4-201ENST00000509611 723 ntBASIC15.4■□□□□ 0.06
ZNF546Q86UE3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 AC005837.3-201ENST00000612163 286 ntBASIC15.4■□□□□ 0.06
ZNF546Q86UE3 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 AC100791.3-201ENST00000617619 330 ntBASIC15.4■□□□□ 0.06
ZNF546Q86UE3 AC013268.1-206ENST00000638368 961 ntBASIC15.4■□□□□ 0.06
ZNF546Q86UE3 AC112229.1-201ENST00000639295 961 ntBASIC15.4■□□□□ 0.06
ZNF546Q86UE3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF546Q86UE3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 AC105020.6-201ENST00000621523 1217 ntBASIC15.39■□□□□ 0.05
ZNF546Q86UE3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF546Q86UE3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF546Q86UE3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF546Q86UE3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF546Q86UE3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.38■□□□□ 0.05
ZNF546Q86UE3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF546Q86UE3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC15.38■□□□□ 0.05
ZNF546Q86UE3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
ZNF546Q86UE3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF546Q86UE3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
ZNF546Q86UE3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
ZNF546Q86UE3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF546Q86UE3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF546Q86UE3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF546Q86UE3 TFP1-202ENST00000475455 1573 ntBASIC15.38■□□□□ 0.05
ZNF546Q86UE3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF546Q86UE3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.38■□□□□ 0.05
ZNF546Q86UE3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF546Q86UE3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms