Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SCXQ7RTU7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC12.25□□□□□ -0.45
SCXQ7RTU7 AC104076.2-201ENST00000448912 469 ntBASIC12.25□□□□□ -0.45
SCXQ7RTU7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC12.25□□□□□ -0.45
SCXQ7RTU7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
SCXQ7RTU7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC12.25□□□□□ -0.45
SCXQ7RTU7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
SCXQ7RTU7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC12.25□□□□□ -0.45
SCXQ7RTU7 AL160286.2-201ENST00000567150 934 ntBASIC12.25□□□□□ -0.45
SCXQ7RTU7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SCXQ7RTU7 AC087388.1-201ENST00000571370 1112 ntBASIC12.25□□□□□ -0.45
SCXQ7RTU7 NTF6B-201ENST00000591913 560 ntBASIC12.25□□□□□ -0.45
SCXQ7RTU7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SCXQ7RTU7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SCXQ7RTU7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SCXQ7RTU7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SCXQ7RTU7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SCXQ7RTU7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC12.25□□□□□ -0.45
SCXQ7RTU7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC12.25□□□□□ -0.45
SCXQ7RTU7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
SCXQ7RTU7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SCXQ7RTU7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC12.25□□□□□ -0.45
SCXQ7RTU7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SCXQ7RTU7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SCXQ7RTU7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SCXQ7RTU7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SCXQ7RTU7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC12.25□□□□□ -0.45
SCXQ7RTU7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SCXQ7RTU7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SCXQ7RTU7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SCXQ7RTU7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC12.25□□□□□ -0.45
SCXQ7RTU7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SCXQ7RTU7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SCXQ7RTU7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SCXQ7RTU7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC12.24□□□□□ -0.45
SCXQ7RTU7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SCXQ7RTU7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
SCXQ7RTU7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
SCXQ7RTU7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SCXQ7RTU7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SCXQ7RTU7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SCXQ7RTU7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SCXQ7RTU7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SCXQ7RTU7 HMGA1P5-201ENST00000412453 271 ntBASIC12.24□□□□□ -0.45
SCXQ7RTU7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC12.24□□□□□ -0.45
SCXQ7RTU7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC12.24□□□□□ -0.45
SCXQ7RTU7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC12.24□□□□□ -0.45
SCXQ7RTU7 NME1-207ENST00000480143 964 ntTSL 2 BASIC12.24□□□□□ -0.45
SCXQ7RTU7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SCXQ7RTU7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC12.24□□□□□ -0.45
SCXQ7RTU7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC12.24□□□□□ -0.45
SCXQ7RTU7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SCXQ7RTU7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
SCXQ7RTU7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SCXQ7RTU7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC12.24□□□□□ -0.45
SCXQ7RTU7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SCXQ7RTU7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC12.24□□□□□ -0.45
SCXQ7RTU7 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SCXQ7RTU7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SCXQ7RTU7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SCXQ7RTU7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SCXQ7RTU7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SCXQ7RTU7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SCXQ7RTU7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SCXQ7RTU7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC12.23□□□□□ -0.45
SCXQ7RTU7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCXQ7RTU7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SCXQ7RTU7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCXQ7RTU7 LINC01465-201ENST00000408887 1940 ntBASIC12.23□□□□□ -0.45
SCXQ7RTU7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC12.23□□□□□ -0.45
SCXQ7RTU7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCXQ7RTU7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCXQ7RTU7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC12.23□□□□□ -0.45
SCXQ7RTU7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCXQ7RTU7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SCXQ7RTU7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SCXQ7RTU7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC12.23□□□□□ -0.45
SCXQ7RTU7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCXQ7RTU7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SCXQ7RTU7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC12.23□□□□□ -0.45
SCXQ7RTU7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCXQ7RTU7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCXQ7RTU7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCXQ7RTU7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SCXQ7RTU7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC12.23□□□□□ -0.45
SCXQ7RTU7 SLC25A1P2-201ENST00000430693 912 ntBASIC12.23□□□□□ -0.45
SCXQ7RTU7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SCXQ7RTU7 WWOX-216ENST00000569818 525 ntBASIC12.23□□□□□ -0.45
SCXQ7RTU7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC12.23□□□□□ -0.45
SCXQ7RTU7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC12.23□□□□□ -0.45
SCXQ7RTU7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SCXQ7RTU7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SCXQ7RTU7 OR6D1P-203ENST00000641209 4860 ntBASIC12.23□□□□□ -0.45
SCXQ7RTU7 PCDHB18P-201ENST00000524813 2368 ntBASIC12.23□□□□□ -0.45
SCXQ7RTU7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC12.23□□□□□ -0.45
SCXQ7RTU7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SCXQ7RTU7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SCXQ7RTU7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SCXQ7RTU7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC12.23□□□□□ -0.45
SCXQ7RTU7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms