Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC23.35■■□□□ 1.33
COPS6Q7L5N1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COPS6Q7L5N1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
COPS6Q7L5N1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COPS6Q7L5N1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC23.34■■□□□ 1.33
COPS6Q7L5N1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COPS6Q7L5N1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COPS6Q7L5N1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC23.34■■□□□ 1.33
COPS6Q7L5N1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
COPS6Q7L5N1 MIR149-201ENST00000384879 89 ntBASIC23.34■■□□□ 1.33
COPS6Q7L5N1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC23.34■■□□□ 1.33
COPS6Q7L5N1 TPM4P1-201ENST00000436100 807 ntBASIC23.34■■□□□ 1.33
COPS6Q7L5N1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COPS6Q7L5N1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC23.34■■□□□ 1.33
COPS6Q7L5N1 PNN-202ENST00000553331 656 ntTSL 3 BASIC23.34■■□□□ 1.33
COPS6Q7L5N1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC23.34■■□□□ 1.33
COPS6Q7L5N1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
COPS6Q7L5N1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COPS6Q7L5N1 MYLKP1-201ENST00000509077 1580 ntBASIC23.34■■□□□ 1.33
COPS6Q7L5N1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COPS6Q7L5N1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COPS6Q7L5N1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COPS6Q7L5N1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
COPS6Q7L5N1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COPS6Q7L5N1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
COPS6Q7L5N1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COPS6Q7L5N1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
COPS6Q7L5N1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COPS6Q7L5N1 AC026396.1-201ENST00000419388 421 ntBASIC23.33■■□□□ 1.33
COPS6Q7L5N1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC23.33■■□□□ 1.33
COPS6Q7L5N1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC23.33■■□□□ 1.33
COPS6Q7L5N1 AL691432.3-201ENST00000621860 400 ntBASIC23.33■■□□□ 1.33
COPS6Q7L5N1 AC124864.1-201ENST00000623408 392 ntBASIC23.33■■□□□ 1.33
COPS6Q7L5N1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
COPS6Q7L5N1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC23.33■■□□□ 1.33
COPS6Q7L5N1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
COPS6Q7L5N1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
COPS6Q7L5N1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
COPS6Q7L5N1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
COPS6Q7L5N1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
COPS6Q7L5N1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
COPS6Q7L5N1 AC009102.3-201ENST00000623118 1491 ntBASIC23.32■■□□□ 1.32
COPS6Q7L5N1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COPS6Q7L5N1 SDHAP2-201ENST00000455183 2001 ntBASIC23.32■■□□□ 1.32
COPS6Q7L5N1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COPS6Q7L5N1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COPS6Q7L5N1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COPS6Q7L5N1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COPS6Q7L5N1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
COPS6Q7L5N1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC23.32■■□□□ 1.32
COPS6Q7L5N1 RN7SL510P-201ENST00000581311 263 ntBASIC23.32■■□□□ 1.32
COPS6Q7L5N1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC23.32■■□□□ 1.32
COPS6Q7L5N1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC23.32■■□□□ 1.32
COPS6Q7L5N1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COPS6Q7L5N1 AL592071.1-201ENST00000611956 408 ntBASIC23.32■■□□□ 1.32
COPS6Q7L5N1 AC004263.2-201ENST00000617183 678 ntBASIC23.32■■□□□ 1.32
COPS6Q7L5N1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COPS6Q7L5N1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
COPS6Q7L5N1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
COPS6Q7L5N1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COPS6Q7L5N1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
COPS6Q7L5N1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC23.31■■□□□ 1.32
COPS6Q7L5N1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
COPS6Q7L5N1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
COPS6Q7L5N1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
COPS6Q7L5N1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COPS6Q7L5N1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC23.31■■□□□ 1.32
COPS6Q7L5N1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COPS6Q7L5N1 AC233702.3-201ENST00000578656 1387 ntBASIC23.31■■□□□ 1.32
COPS6Q7L5N1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COPS6Q7L5N1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COPS6Q7L5N1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC23.31■■□□□ 1.32
COPS6Q7L5N1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
COPS6Q7L5N1 AC012615.1-201ENST00000565797 1299 ntBASIC23.31■■□□□ 1.32
COPS6Q7L5N1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC23.31■■□□□ 1.32
COPS6Q7L5N1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COPS6Q7L5N1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC23.31■■□□□ 1.32
COPS6Q7L5N1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC23.31■■□□□ 1.32
COPS6Q7L5N1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COPS6Q7L5N1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COPS6Q7L5N1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC23.31■■□□□ 1.32
COPS6Q7L5N1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
COPS6Q7L5N1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
COPS6Q7L5N1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
COPS6Q7L5N1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COPS6Q7L5N1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COPS6Q7L5N1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COPS6Q7L5N1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
COPS6Q7L5N1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC23.3■■□□□ 1.32
COPS6Q7L5N1 TSPY19P-201ENST00000418461 509 ntBASIC23.3■■□□□ 1.32
COPS6Q7L5N1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
COPS6Q7L5N1 TSPY18P-201ENST00000441642 509 ntBASIC23.3■■□□□ 1.32
COPS6Q7L5N1 GUSBP12-201ENST00000513727 720 ntBASIC23.3■■□□□ 1.32
COPS6Q7L5N1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COPS6Q7L5N1 AL732292.2-201ENST00000609649 430 ntBASIC23.3■■□□□ 1.32
COPS6Q7L5N1 AC112777.1-201ENST00000540175 1423 ntBASIC23.3■■□□□ 1.32
COPS6Q7L5N1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COPS6Q7L5N1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC23.3■■□□□ 1.32
COPS6Q7L5N1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COPS6Q7L5N1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms