Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 CDY12P-201ENST00000440679 1015 ntBASIC21.39■■□□□ 1.01
PPP4R3CPQ6ZMV5 MTND4P25-201ENST00000441039 533 ntBASIC21.39■■□□□ 1.01
PPP4R3CPQ6ZMV5 CDY13P-201ENST00000445813 1015 ntBASIC21.39■■□□□ 1.01
PPP4R3CPQ6ZMV5 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC21.39■■□□□ 1.01
PPP4R3CPQ6ZMV5 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC21.39■■□□□ 1.01
PPP4R3CPQ6ZMV5 TSPY15P-201ENST00000457163 923 ntBASIC21.39■■□□□ 1.01
PPP4R3CPQ6ZMV5 AC116562.2-201ENST00000507042 360 ntBASIC21.39■■□□□ 1.01
PPP4R3CPQ6ZMV5 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.39■■□□□ 1.01
PPP4R3CPQ6ZMV5 BX088651.1-201ENST00000540551 451 ntBASIC21.39■■□□□ 1.01
PPP4R3CPQ6ZMV5 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC21.39■■□□□ 1.01
PPP4R3CPQ6ZMV5 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC21.39■■□□□ 1.01
PPP4R3CPQ6ZMV5 AC026271.3-201ENST00000571884 352 ntBASIC21.39■■□□□ 1.01
PPP4R3CPQ6ZMV5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.39■■□□□ 1.01
PPP4R3CPQ6ZMV5 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC21.39■■□□□ 1.01
PPP4R3CPQ6ZMV5 AC073912.3-201ENST00000624414 853 ntBASIC21.39■■□□□ 1.01
PPP4R3CPQ6ZMV5 HLA-A-209ENST00000638375 975 ntBASIC21.39■■□□□ 1.01
PPP4R3CPQ6ZMV5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PPP4R3CPQ6ZMV5 AC010460.3-201ENST00000511359 1579 ntBASIC21.39■■□□□ 1.01
PPP4R3CPQ6ZMV5 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
PPP4R3CPQ6ZMV5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PPP4R3CPQ6ZMV5 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PPP4R3CPQ6ZMV5 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PPP4R3CPQ6ZMV5 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PPP4R3CPQ6ZMV5 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PPP4R3CPQ6ZMV5 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PPP4R3CPQ6ZMV5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 TBC1D3P4-201ENST00000338790 1075 ntBASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 CSTF3-203ENST00000438862 1132 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 MTCO3P28-201ENST00000513351 515 ntBASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 OR8X1P-201ENST00000534542 869 ntBASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 AC090246.1-201ENST00000616499 426 ntBASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 CCDC32-214ENST00000561011 1577 ntTSL 2 BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3CPQ6ZMV5 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 AC004980.1-204ENST00000429707 299 ntBASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 AC006355.1-201ENST00000440982 1012 ntBASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 AP006222.1-201ENST00000442116 1292 ntTSL 5 BASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 MTND3P12-201ENST00000559068 328 ntBASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 REXO1L10P-201ENST00000615707 1290 ntBASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 REXO1L12P-201ENST00000622156 912 ntBASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3CPQ6ZMV5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.36■■□□□ 1.01
PPP4R3CPQ6ZMV5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PPP4R3CPQ6ZMV5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4R3CPQ6ZMV5 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4R3CPQ6ZMV5 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
PPP4R3CPQ6ZMV5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.36■■□□□ 1.01
PPP4R3CPQ6ZMV5 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4R3CPQ6ZMV5 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4R3CPQ6ZMV5 ADAM10-203ENST00000402627 861 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4R3CPQ6ZMV5 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC21.36■■□□□ 1.01
PPP4R3CPQ6ZMV5 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC21.36■■□□□ 1.01
PPP4R3CPQ6ZMV5 AC096759.2-202ENST00000515230 777 ntTSL 3 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms