Protein–RNA interactions for Protein: Q6WKZ4

RAB11FIP1, Rab11 family-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1Q6WKZ4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB11FIP1Q6WKZ4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB11FIP1Q6WKZ4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB11FIP1Q6WKZ4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB11FIP1Q6WKZ4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.59■□□□□ 0.57
RAB11FIP1Q6WKZ4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB11FIP1Q6WKZ4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB11FIP1Q6WKZ4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.59■□□□□ 0.57
RAB11FIP1Q6WKZ4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB11FIP1Q6WKZ4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.59■□□□□ 0.57
RAB11FIP1Q6WKZ4 CLEC4GP1-201ENST00000596555 870 ntBASIC18.59■□□□□ 0.57
RAB11FIP1Q6WKZ4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB11FIP1Q6WKZ4 Z98044.1-201ENST00000632503 1764 ntBASIC18.59■□□□□ 0.57
RAB11FIP1Q6WKZ4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB11FIP1Q6WKZ4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB11FIP1Q6WKZ4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB11FIP1Q6WKZ4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB11FIP1Q6WKZ4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB11FIP1Q6WKZ4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB11FIP1Q6WKZ4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RAB11FIP1Q6WKZ4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB11FIP1Q6WKZ4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB11FIP1Q6WKZ4 AC005332.7-201ENST00000614046 2005 ntBASIC18.59■□□□□ 0.57
RAB11FIP1Q6WKZ4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.59■□□□□ 0.57
RAB11FIP1Q6WKZ4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB11FIP1Q6WKZ4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB11FIP1Q6WKZ4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAB11FIP1Q6WKZ4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAB11FIP1Q6WKZ4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAB11FIP1Q6WKZ4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.58■□□□□ 0.57
RAB11FIP1Q6WKZ4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAB11FIP1Q6WKZ4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAB11FIP1Q6WKZ4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAB11FIP1Q6WKZ4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.58■□□□□ 0.57
RAB11FIP1Q6WKZ4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RAB11FIP1Q6WKZ4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RAB11FIP1Q6WKZ4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RAB11FIP1Q6WKZ4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
RAB11FIP1Q6WKZ4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAB11FIP1Q6WKZ4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
RAB11FIP1Q6WKZ4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAB11FIP1Q6WKZ4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.58■□□□□ 0.56
RAB11FIP1Q6WKZ4 NPAP1P7-201ENST00000613027 823 ntBASIC18.58■□□□□ 0.56
RAB11FIP1Q6WKZ4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB11FIP1Q6WKZ4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
RAB11FIP1Q6WKZ4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB11FIP1Q6WKZ4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.58■□□□□ 0.56
RAB11FIP1Q6WKZ4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB11FIP1Q6WKZ4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RAB11FIP1Q6WKZ4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RAB11FIP1Q6WKZ4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 TSPY22P-201ENST00000427496 604 ntBASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 DUSP5P1-201ENST00000441325 1139 ntBASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 AC092329.2-201ENST00000598402 547 ntBASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 AC018445.3-201ENST00000624177 1945 ntBASIC18.57■□□□□ 0.56
RAB11FIP1Q6WKZ4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB11FIP1Q6WKZ4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB11FIP1Q6WKZ4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB11FIP1Q6WKZ4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB11FIP1Q6WKZ4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.56■□□□□ 0.56
RAB11FIP1Q6WKZ4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RAB11FIP1Q6WKZ4 AC093525.10-201ENST00000625130 1569 ntBASIC18.56■□□□□ 0.56
RAB11FIP1Q6WKZ4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RAB11FIP1Q6WKZ4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB11FIP1Q6WKZ4 AC116562.4-201ENST00000641316 2276 ntBASIC18.56■□□□□ 0.56
RAB11FIP1Q6WKZ4 AC120498.9-201ENST00000339021 3867 ntBASIC18.56■□□□□ 0.56
RAB11FIP1Q6WKZ4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB11FIP1Q6WKZ4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB11FIP1Q6WKZ4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RAB11FIP1Q6WKZ4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB11FIP1Q6WKZ4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB11FIP1Q6WKZ4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.56■□□□□ 0.56
RAB11FIP1Q6WKZ4 PVRIG2P-201ENST00000435460 978 ntBASIC18.56■□□□□ 0.56
RAB11FIP1Q6WKZ4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms