Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 AC091799.1-201ENST00000422823 811 ntBASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 AC008894.3-201ENST00000624324 3103 ntBASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 AC138907.5-202ENST00000569484 235 ntBASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 TPRG1LP1-201ENST00000598702 760 ntBASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
KCNIP4Q6PIL6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 AC123595.1-201ENST00000440769 1046 ntBASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 FEM1AP3-201ENST00000403722 1741 ntBASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.34□□□□□ -0.11
KCNIP4Q6PIL6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms