Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 B3GAT3P1-201ENST00000471720 806 ntBASIC18.92■□□□□ 0.62
CASC4Q6P4E1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 ITM2C-210ENST00000620962 501 ntBASIC18.92■□□□□ 0.62
CASC4Q6P4E1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 MYC-208ENST00000641036 567 ntBASIC18.92■□□□□ 0.62
CASC4Q6P4E1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
CASC4Q6P4E1 AL135905.2-201ENST00000584934 1404 ntBASIC18.91■□□□□ 0.62
CASC4Q6P4E1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.9■□□□□ 0.62
CASC4Q6P4E1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
CASC4Q6P4E1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CASC4Q6P4E1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASC4Q6P4E1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CASC4Q6P4E1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.9■□□□□ 0.62
CASC4Q6P4E1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CASC4Q6P4E1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASC4Q6P4E1 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASC4Q6P4E1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASC4Q6P4E1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CASC4Q6P4E1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.9■□□□□ 0.62
CASC4Q6P4E1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CASC4Q6P4E1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASC4Q6P4E1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.9■□□□□ 0.62
CASC4Q6P4E1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.9■□□□□ 0.62
CASC4Q6P4E1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.9■□□□□ 0.62
CASC4Q6P4E1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CASC4Q6P4E1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CASC4Q6P4E1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.9■□□□□ 0.62
CASC4Q6P4E1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CASC4Q6P4E1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CASC4Q6P4E1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASC4Q6P4E1 ABALON-201ENST00000629058 1903 ntBASIC18.9■□□□□ 0.62
CASC4Q6P4E1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASC4Q6P4E1 FSCN1P1-201ENST00000568912 1481 ntBASIC18.9■□□□□ 0.62
CASC4Q6P4E1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASC4Q6P4E1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
CASC4Q6P4E1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CASC4Q6P4E1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.89■□□□□ 0.61
CASC4Q6P4E1 AL133373.2-201ENST00000623187 2828 ntBASIC18.89■□□□□ 0.61
CASC4Q6P4E1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CASC4Q6P4E1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CASC4Q6P4E1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASC4Q6P4E1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASC4Q6P4E1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CASC4Q6P4E1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.89■□□□□ 0.61
CASC4Q6P4E1 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.89■□□□□ 0.61
CASC4Q6P4E1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CASC4Q6P4E1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.89■□□□□ 0.61
CASC4Q6P4E1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CASC4Q6P4E1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.89■□□□□ 0.61
CASC4Q6P4E1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.89■□□□□ 0.61
CASC4Q6P4E1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.89■□□□□ 0.61
CASC4Q6P4E1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.89■□□□□ 0.61
CASC4Q6P4E1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.89■□□□□ 0.61
CASC4Q6P4E1 CD177P1-201ENST00000606252 935 ntBASIC18.89■□□□□ 0.61
CASC4Q6P4E1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.89■□□□□ 0.61
CASC4Q6P4E1 AC005332.8-201ENST00000622750 2735 ntBASIC18.89■□□□□ 0.61
CASC4Q6P4E1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CASC4Q6P4E1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASC4Q6P4E1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASC4Q6P4E1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASC4Q6P4E1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASC4Q6P4E1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms