Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRNP1Q6NT89 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRNP1Q6NT89 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRNP1Q6NT89 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRNP1Q6NT89 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TRNP1Q6NT89 LIN28AP1-201ENST00000429574 405 ntBASIC19.27■□□□□ 0.68
TRNP1Q6NT89 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRNP1Q6NT89 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRNP1Q6NT89 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRNP1Q6NT89 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRNP1Q6NT89 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRNP1Q6NT89 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.27■□□□□ 0.68
TRNP1Q6NT89 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.27■□□□□ 0.68
TRNP1Q6NT89 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.27■□□□□ 0.68
TRNP1Q6NT89 AC139887.4-201ENST00000607877 719 ntBASIC19.27■□□□□ 0.68
TRNP1Q6NT89 AC011558.1-201ENST00000623459 338 ntBASIC19.27■□□□□ 0.68
TRNP1Q6NT89 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRNP1Q6NT89 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.27■□□□□ 0.67
TRNP1Q6NT89 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRNP1Q6NT89 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.26■□□□□ 0.67
TRNP1Q6NT89 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 RN7SL850P-201ENST00000579959 291 ntBASIC19.26■□□□□ 0.67
TRNP1Q6NT89 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 AL157888.1-201ENST00000631930 593 ntBASIC19.26■□□□□ 0.67
TRNP1Q6NT89 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRNP1Q6NT89 AC007613.1-201ENST00000572811 2597 ntBASIC19.26■□□□□ 0.67
TRNP1Q6NT89 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRNP1Q6NT89 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.25■□□□□ 0.67
TRNP1Q6NT89 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRNP1Q6NT89 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.25■□□□□ 0.67
TRNP1Q6NT89 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.25■□□□□ 0.67
TRNP1Q6NT89 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.25■□□□□ 0.67
TRNP1Q6NT89 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRNP1Q6NT89 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
TRNP1Q6NT89 AC093677.2-201ENST00000600169 1863 ntBASIC19.25■□□□□ 0.67
TRNP1Q6NT89 AC009102.3-201ENST00000623118 1491 ntBASIC19.25■□□□□ 0.67
TRNP1Q6NT89 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRNP1Q6NT89 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.25■□□□□ 0.67
TRNP1Q6NT89 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRNP1Q6NT89 MIR149-201ENST00000384879 89 ntBASIC19.25■□□□□ 0.67
TRNP1Q6NT89 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.25■□□□□ 0.67
TRNP1Q6NT89 ATP5G1P1-201ENST00000448724 379 ntBASIC19.25■□□□□ 0.67
TRNP1Q6NT89 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.25■□□□□ 0.67
TRNP1Q6NT89 COX11P1-201ENST00000489116 835 ntBASIC19.25■□□□□ 0.67
TRNP1Q6NT89 YBX1P2-201ENST00000489612 999 ntBASIC19.25■□□□□ 0.67
TRNP1Q6NT89 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
TRNP1Q6NT89 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.25■□□□□ 0.67
TRNP1Q6NT89 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRNP1Q6NT89 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRNP1Q6NT89 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRNP1Q6NT89 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.25■□□□□ 0.67
TRNP1Q6NT89 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.25■□□□□ 0.67
TRNP1Q6NT89 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.25■□□□□ 0.67
TRNP1Q6NT89 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRNP1Q6NT89 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.25■□□□□ 0.67
TRNP1Q6NT89 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRNP1Q6NT89 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.25■□□□□ 0.67
TRNP1Q6NT89 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.24■□□□□ 0.67
TRNP1Q6NT89 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TRNP1Q6NT89 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRNP1Q6NT89 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRNP1Q6NT89 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.24■□□□□ 0.67
TRNP1Q6NT89 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRNP1Q6NT89 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
TRNP1Q6NT89 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRNP1Q6NT89 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TRNP1Q6NT89 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRNP1Q6NT89 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRNP1Q6NT89 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.24■□□□□ 0.67
TRNP1Q6NT89 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRNP1Q6NT89 AC104076.2-201ENST00000448912 469 ntBASIC19.24■□□□□ 0.67
TRNP1Q6NT89 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms