Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRPF38BQ5VTL8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20■□□□□ 0.79
PRPF38BQ5VTL8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20■□□□□ 0.79
PRPF38BQ5VTL8 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRPF38BQ5VTL8 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRPF38BQ5VTL8 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC20■□□□□ 0.79
PRPF38BQ5VTL8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20■□□□□ 0.79
PRPF38BQ5VTL8 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRPF38BQ5VTL8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20■□□□□ 0.79
PRPF38BQ5VTL8 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRPF38BQ5VTL8 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20■□□□□ 0.79
PRPF38BQ5VTL8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRPF38BQ5VTL8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PRPF38BQ5VTL8 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20■□□□□ 0.79
PRPF38BQ5VTL8 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20■□□□□ 0.79
PRPF38BQ5VTL8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20■□□□□ 0.79
PRPF38BQ5VTL8 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20■□□□□ 0.79
PRPF38BQ5VTL8 AC015911.4-201ENST00000588022 1070 ntBASIC20■□□□□ 0.79
PRPF38BQ5VTL8 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20■□□□□ 0.79
PRPF38BQ5VTL8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20■□□□□ 0.79
PRPF38BQ5VTL8 ANKRD18DP-204ENST00000455355 1975 ntBASIC20■□□□□ 0.79
PRPF38BQ5VTL8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRPF38BQ5VTL8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PRPF38BQ5VTL8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRPF38BQ5VTL8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PRPF38BQ5VTL8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRPF38BQ5VTL8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 AC018845.2-201ENST00000568326 409 ntBASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 AL513210.1-201ENST00000629608 234 ntBASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.99■□□□□ 0.79
PRPF38BQ5VTL8 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 CRYGEP-201ENST00000412192 528 ntBASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 KRT18P27-201ENST00000427733 1299 ntBASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 AC011467.2-201ENST00000598425 242 ntBASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 AC008761.3-201ENST00000624803 892 ntBASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 LINC00628-201ENST00000628516 1289 ntBASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PRPF38BQ5VTL8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRPF38BQ5VTL8 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRPF38BQ5VTL8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRPF38BQ5VTL8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PRPF38BQ5VTL8 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PRPF38BQ5VTL8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PRPF38BQ5VTL8 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRPF38BQ5VTL8 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.97■□□□□ 0.79
PRPF38BQ5VTL8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.97■□□□□ 0.79
PRPF38BQ5VTL8 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PRPF38BQ5VTL8 NME2P1-201ENST00000426182 414 ntBASIC19.97■□□□□ 0.79
PRPF38BQ5VTL8 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PRPF38BQ5VTL8 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
PRPF38BQ5VTL8 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.97■□□□□ 0.79
PRPF38BQ5VTL8 DUX4L27-201ENST00000554796 1261 ntBASIC19.97■□□□□ 0.79
PRPF38BQ5VTL8 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.97■□□□□ 0.79
PRPF38BQ5VTL8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRPF38BQ5VTL8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms