Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 AC112497.1-201ENST00000624824 639 ntBASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
RSPO1Q2MKA7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.02■□□□□ 0.16
RSPO1Q2MKA7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.02■□□□□ 0.16
RSPO1Q2MKA7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.02■□□□□ 0.16
RSPO1Q2MKA7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
RSPO1Q2MKA7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.02■□□□□ 0.16
RSPO1Q2MKA7 AC018470.1-201ENST00000624790 3129 ntBASIC16.02■□□□□ 0.16
RSPO1Q2MKA7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RSPO1Q2MKA7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RSPO1Q2MKA7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
RSPO1Q2MKA7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
RSPO1Q2MKA7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RSPO1Q2MKA7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RSPO1Q2MKA7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
RSPO1Q2MKA7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RSPO1Q2MKA7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
RSPO1Q2MKA7 HMGA1P5-201ENST00000412453 271 ntBASIC16.02■□□□□ 0.16
RSPO1Q2MKA7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.02■□□□□ 0.16
RSPO1Q2MKA7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RSPO1Q2MKA7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RSPO1Q2MKA7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.15
RSPO1Q2MKA7 AL133373.2-201ENST00000623187 2828 ntBASIC16.02■□□□□ 0.15
RSPO1Q2MKA7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RSPO1Q2MKA7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RSPO1Q2MKA7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.02■□□□□ 0.15
RSPO1Q2MKA7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RSPO1Q2MKA7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RSPO1Q2MKA7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.01■□□□□ 0.15
RSPO1Q2MKA7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.01■□□□□ 0.15
RSPO1Q2MKA7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RSPO1Q2MKA7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RSPO1Q2MKA7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RSPO1Q2MKA7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RSPO1Q2MKA7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RSPO1Q2MKA7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.01■□□□□ 0.15
RSPO1Q2MKA7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RSPO1Q2MKA7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.01■□□□□ 0.15
RSPO1Q2MKA7 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.01■□□□□ 0.15
RSPO1Q2MKA7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.01■□□□□ 0.15
RSPO1Q2MKA7 SEC1P-202ENST00000473944 940 ntBASIC16.01■□□□□ 0.15
RSPO1Q2MKA7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.01■□□□□ 0.15
RSPO1Q2MKA7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.01■□□□□ 0.15
RSPO1Q2MKA7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.01■□□□□ 0.15
RSPO1Q2MKA7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RSPO1Q2MKA7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RSPO1Q2MKA7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RSPO1Q2MKA7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RSPO1Q2MKA7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.01■□□□□ 0.15
RSPO1Q2MKA7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RSPO1Q2MKA7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16■□□□□ 0.15
RSPO1Q2MKA7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RSPO1Q2MKA7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16■□□□□ 0.15
RSPO1Q2MKA7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16■□□□□ 0.15
RSPO1Q2MKA7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RSPO1Q2MKA7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16■□□□□ 0.15
RSPO1Q2MKA7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RSPO1Q2MKA7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16■□□□□ 0.15
RSPO1Q2MKA7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RSPO1Q2MKA7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RSPO1Q2MKA7 KRT18P22-201ENST00000402024 1347 ntBASIC16■□□□□ 0.15
RSPO1Q2MKA7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
RSPO1Q2MKA7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
RSPO1Q2MKA7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16■□□□□ 0.15
RSPO1Q2MKA7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16■□□□□ 0.15
RSPO1Q2MKA7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RSPO1Q2MKA7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RSPO1Q2MKA7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RSPO1Q2MKA7 AC009102.3-201ENST00000623118 1491 ntBASIC16■□□□□ 0.15
RSPO1Q2MKA7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RSPO1Q2MKA7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RSPO1Q2MKA7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16■□□□□ 0.15
RSPO1Q2MKA7 MIR149-201ENST00000384879 89 ntBASIC16■□□□□ 0.15
RSPO1Q2MKA7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RSPO1Q2MKA7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16■□□□□ 0.15
RSPO1Q2MKA7 AC009947.2-201ENST00000444014 672 ntBASIC16■□□□□ 0.15
RSPO1Q2MKA7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16■□□□□ 0.15
RSPO1Q2MKA7 DUT-205ENST00000558813 769 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms