Protein–RNA interactions for Protein: Q12805

EFEMP1, EGF-containing fibulin-like extracellular matrix protein 1, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1Q12805 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFEMP1Q12805 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
EFEMP1Q12805 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFEMP1Q12805 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.24■□□□□ 0.67
EFEMP1Q12805 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.23■□□□□ 0.67
EFEMP1Q12805 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.23■□□□□ 0.67
EFEMP1Q12805 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFEMP1Q12805 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFEMP1Q12805 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EFEMP1Q12805 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFEMP1Q12805 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
EFEMP1Q12805 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFEMP1Q12805 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFEMP1Q12805 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFEMP1Q12805 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
EFEMP1Q12805 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.23■□□□□ 0.67
EFEMP1Q12805 HLA-F-220ENST00000434407 884 ntBASIC19.23■□□□□ 0.67
EFEMP1Q12805 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.23■□□□□ 0.67
EFEMP1Q12805 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.23■□□□□ 0.67
EFEMP1Q12805 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.23■□□□□ 0.67
EFEMP1Q12805 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.23■□□□□ 0.67
EFEMP1Q12805 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.23■□□□□ 0.67
EFEMP1Q12805 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EFEMP1Q12805 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
EFEMP1Q12805 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFEMP1Q12805 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFEMP1Q12805 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFEMP1Q12805 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFEMP1Q12805 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
EFEMP1Q12805 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
EFEMP1Q12805 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EFEMP1Q12805 ANO7L1-203ENST00000602586 1720 ntBASIC19.22■□□□□ 0.67
EFEMP1Q12805 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.22■□□□□ 0.67
EFEMP1Q12805 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFEMP1Q12805 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFEMP1Q12805 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFEMP1Q12805 AL163051.1-201ENST00000569214 1512 ntBASIC19.22■□□□□ 0.67
EFEMP1Q12805 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFEMP1Q12805 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFEMP1Q12805 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
EFEMP1Q12805 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.22■□□□□ 0.67
EFEMP1Q12805 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFEMP1Q12805 UPK3BP1-201ENST00000428678 509 ntBASIC19.22■□□□□ 0.67
EFEMP1Q12805 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
EFEMP1Q12805 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFEMP1Q12805 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.22■□□□□ 0.67
EFEMP1Q12805 AC116407.4-201ENST00000623319 1061 ntBASIC19.22■□□□□ 0.67
EFEMP1Q12805 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
EFEMP1Q12805 AC112777.1-201ENST00000540175 1423 ntBASIC19.22■□□□□ 0.67
EFEMP1Q12805 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.22■□□□□ 0.67
EFEMP1Q12805 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFEMP1Q12805 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.22■□□□□ 0.67
EFEMP1Q12805 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EFEMP1Q12805 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFEMP1Q12805 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.21■□□□□ 0.67
EFEMP1Q12805 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFEMP1Q12805 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EFEMP1Q12805 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EFEMP1Q12805 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.21■□□□□ 0.67
EFEMP1Q12805 AL645929.1-201ENST00000420084 975 ntBASIC19.21■□□□□ 0.67
EFEMP1Q12805 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.21■□□□□ 0.67
EFEMP1Q12805 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EFEMP1Q12805 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.21■□□□□ 0.67
EFEMP1Q12805 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EFEMP1Q12805 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.21■□□□□ 0.67
EFEMP1Q12805 AC009065.1-201ENST00000564055 1225 ntBASIC19.21■□□□□ 0.67
EFEMP1Q12805 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.21■□□□□ 0.67
EFEMP1Q12805 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.21■□□□□ 0.67
EFEMP1Q12805 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFEMP1Q12805 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EFEMP1Q12805 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
EFEMP1Q12805 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.21■□□□□ 0.67
EFEMP1Q12805 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
EFEMP1Q12805 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EFEMP1Q12805 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EFEMP1Q12805 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFEMP1Q12805 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFEMP1Q12805 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EFEMP1Q12805 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFEMP1Q12805 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EFEMP1Q12805 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
EFEMP1Q12805 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
EFEMP1Q12805 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.2■□□□□ 0.66
EFEMP1Q12805 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
EFEMP1Q12805 MYLKP1-201ENST00000509077 1580 ntBASIC19.2■□□□□ 0.66
EFEMP1Q12805 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFEMP1Q12805 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.2■□□□□ 0.66
EFEMP1Q12805 PVRIG2P-201ENST00000435460 978 ntBASIC19.2■□□□□ 0.66
EFEMP1Q12805 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.2■□□□□ 0.66
EFEMP1Q12805 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.2■□□□□ 0.66
EFEMP1Q12805 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.2■□□□□ 0.66
EFEMP1Q12805 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.2■□□□□ 0.66
EFEMP1Q12805 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFEMP1Q12805 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFEMP1Q12805 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFEMP1Q12805 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFEMP1Q12805 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFEMP1Q12805 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EFEMP1Q12805 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.19■□□□□ 0.66
EFEMP1Q12805 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms