Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
SYCNQ0VAF6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SYCNQ0VAF6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SYCNQ0VAF6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SYCNQ0VAF6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC12.27□□□□□ -0.45
SYCNQ0VAF6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SYCNQ0VAF6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC12.27□□□□□ -0.45
SYCNQ0VAF6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SYCNQ0VAF6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SYCNQ0VAF6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SYCNQ0VAF6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SYCNQ0VAF6 MTMR9LP-203ENST00000426597 1545 ntBASIC12.27□□□□□ -0.45
SYCNQ0VAF6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 AC104581.1-202ENST00000635932 2618 ntBASIC12.26□□□□□ -0.45
SYCNQ0VAF6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 NFYC-AS1-201ENST00000606277 1687 ntBASIC12.26□□□□□ -0.45
SYCNQ0VAF6 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 MIR718-201ENST00000390190 70 ntBASIC12.26□□□□□ -0.45
SYCNQ0VAF6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 MESTP1-201ENST00000404287 994 ntBASIC12.26□□□□□ -0.45
SYCNQ0VAF6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 PENK-204ENST00000518770 863 ntTSL 2 BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 AC113410.3-201ENST00000623366 203 ntBASIC12.26□□□□□ -0.45
SYCNQ0VAF6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 AC096733.2-201ENST00000609937 1394 ntBASIC12.26□□□□□ -0.45
SYCNQ0VAF6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SYCNQ0VAF6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 AC009113.1-201ENST00000570267 2443 ntBASIC12.25□□□□□ -0.45
SYCNQ0VAF6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 CRYGFP-201ENST00000418459 633 ntBASIC12.25□□□□□ -0.45
SYCNQ0VAF6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 AC079598.2-202ENST00000546624 1451 ntBASIC12.25□□□□□ -0.45
SYCNQ0VAF6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 AL357033.4-201ENST00000617703 1807 ntBASIC12.25□□□□□ -0.45
SYCNQ0VAF6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms