Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 AL139384.1-201ENST00000612143 3047 ntBASIC14.18□□□□□ -0.14
HIST1H1AQ02539 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 AC073648.6-201ENST00000641589 218 ntBASIC14.18□□□□□ -0.14
HIST1H1AQ02539 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 AL354751.1-201ENST00000412768 1863 ntBASIC14.18□□□□□ -0.14
HIST1H1AQ02539 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HIST1H1AQ02539 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 OR6D1P-203ENST00000641209 4860 ntBASIC14.17□□□□□ -0.14
HIST1H1AQ02539 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 AP002982.1-201ENST00000492365 877 ntBASIC14.17□□□□□ -0.14
HIST1H1AQ02539 RN7SL471P-201ENST00000580476 299 ntBASIC14.17□□□□□ -0.14
HIST1H1AQ02539 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HIST1H1AQ02539 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms