Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDR2Q01850 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDR2Q01850 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDR2Q01850 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.75■□□□□ 0.75
CDR2Q01850 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CDR2Q01850 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDR2Q01850 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CDR2Q01850 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDR2Q01850 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.75■□□□□ 0.75
CDR2Q01850 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CDR2Q01850 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDR2Q01850 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CDR2Q01850 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
CDR2Q01850 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDR2Q01850 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.74■□□□□ 0.75
CDR2Q01850 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDR2Q01850 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDR2Q01850 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CDR2Q01850 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.74■□□□□ 0.75
CDR2Q01850 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDR2Q01850 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CDR2Q01850 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.74■□□□□ 0.75
CDR2Q01850 TSPY15P-201ENST00000457163 923 ntBASIC19.74■□□□□ 0.75
CDR2Q01850 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.74■□□□□ 0.75
CDR2Q01850 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.74■□□□□ 0.75
CDR2Q01850 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDR2Q01850 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDR2Q01850 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDR2Q01850 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDR2Q01850 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CDR2Q01850 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDR2Q01850 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDR2Q01850 AC020763.4-201ENST00000623414 4170 ntBASIC19.74■□□□□ 0.75
CDR2Q01850 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDR2Q01850 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDR2Q01850 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDR2Q01850 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CDR2Q01850 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.73■□□□□ 0.75
CDR2Q01850 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.73■□□□□ 0.75
CDR2Q01850 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.73■□□□□ 0.75
CDR2Q01850 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDR2Q01850 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDR2Q01850 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDR2Q01850 AC007663.1-201ENST00000438948 1240 ntBASIC19.73■□□□□ 0.75
CDR2Q01850 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.73■□□□□ 0.75
CDR2Q01850 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.73■□□□□ 0.75
CDR2Q01850 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.73■□□□□ 0.75
CDR2Q01850 BX088651.1-201ENST00000540551 451 ntBASIC19.73■□□□□ 0.75
CDR2Q01850 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.73■□□□□ 0.75
CDR2Q01850 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.73■□□□□ 0.75
CDR2Q01850 C2orf69P3-201ENST00000565542 1120 ntBASIC19.73■□□□□ 0.75
CDR2Q01850 CR769767.2-201ENST00000622735 460 ntBASIC19.73■□□□□ 0.75
CDR2Q01850 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.73■□□□□ 0.75
CDR2Q01850 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.73■□□□□ 0.75
CDR2Q01850 AC116562.4-202ENST00000641738 218 ntBASIC19.73■□□□□ 0.75
CDR2Q01850 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDR2Q01850 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDR2Q01850 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDR2Q01850 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDR2Q01850 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CDR2Q01850 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDR2Q01850 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDR2Q01850 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDR2Q01850 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDR2Q01850 TSPY14P-201ENST00000303979 915 ntBASIC19.72■□□□□ 0.75
CDR2Q01850 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDR2Q01850 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.72■□□□□ 0.75
CDR2Q01850 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.72■□□□□ 0.75
CDR2Q01850 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDR2Q01850 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDR2Q01850 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDR2Q01850 WWOX-216ENST00000569818 525 ntBASIC19.72■□□□□ 0.75
CDR2Q01850 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDR2Q01850 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDR2Q01850 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDR2Q01850 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.72■□□□□ 0.75
CDR2Q01850 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDR2Q01850 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDR2Q01850 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CDR2Q01850 AC135776.1-201ENST00000319817 2481 ntBASIC19.71■□□□□ 0.75
CDR2Q01850 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDR2Q01850 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDR2Q01850 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDR2Q01850 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDR2Q01850 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
CDR2Q01850 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDR2Q01850 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDR2Q01850 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CDR2Q01850 HOXB1-202ENST00000577092 1414 ntBASIC19.71■□□□□ 0.75
CDR2Q01850 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
CDR2Q01850 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDR2Q01850 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDR2Q01850 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDR2Q01850 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDR2Q01850 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDR2Q01850 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDR2Q01850 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.71■□□□□ 0.75
CDR2Q01850 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CDR2Q01850 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.71■□□□□ 0.75
CDR2Q01850 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms