Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
H3F3AP84243 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.54■□□□□ 0.24
H3F3AP84243 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H3F3AP84243 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
H3F3AP84243 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
H3F3AP84243 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.54■□□□□ 0.24
H3F3AP84243 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
H3F3AP84243 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
H3F3AP84243 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.54■□□□□ 0.24
H3F3AP84243 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
H3F3AP84243 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
H3F3AP84243 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H3F3AP84243 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
H3F3AP84243 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.54■□□□□ 0.24
H3F3AP84243 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H3F3AP84243 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.54■□□□□ 0.24
H3F3AP84243 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
H3F3AP84243 AC120498.9-201ENST00000339021 3867 ntBASIC16.54■□□□□ 0.24
H3F3AP84243 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
H3F3AP84243 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.54■□□□□ 0.24
H3F3AP84243 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.54■□□□□ 0.24
H3F3AP84243 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.54■□□□□ 0.24
H3F3AP84243 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.54■□□□□ 0.24
H3F3AP84243 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.54■□□□□ 0.24
H3F3AP84243 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
H3F3AP84243 AC024243.1-201ENST00000609234 778 ntBASIC16.54■□□□□ 0.24
H3F3AP84243 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
H3F3AP84243 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.54■□□□□ 0.24
H3F3AP84243 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H3F3AP84243 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
H3F3AP84243 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.54■□□□□ 0.24
H3F3AP84243 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
H3F3AP84243 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H3F3AP84243 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
H3F3AP84243 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H3F3AP84243 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H3F3AP84243 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
H3F3AP84243 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H3F3AP84243 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
H3F3AP84243 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
H3F3AP84243 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
H3F3AP84243 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.54■□□□□ 0.24
H3F3AP84243 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.54■□□□□ 0.24
H3F3AP84243 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H3F3AP84243 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
H3F3AP84243 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
H3F3AP84243 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H3F3AP84243 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
H3F3AP84243 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
H3F3AP84243 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
H3F3AP84243 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.53■□□□□ 0.24
H3F3AP84243 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.53■□□□□ 0.24
H3F3AP84243 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
H3F3AP84243 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
H3F3AP84243 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
H3F3AP84243 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H3F3AP84243 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
H3F3AP84243 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
H3F3AP84243 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
H3F3AP84243 AC117947.1-201ENST00000427448 529 ntBASIC16.53■□□□□ 0.24
H3F3AP84243 KRT18P57-201ENST00000443599 1254 ntBASIC16.53■□□□□ 0.24
H3F3AP84243 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.53■□□□□ 0.24
H3F3AP84243 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.53■□□□□ 0.24
H3F3AP84243 YBX1P2-201ENST00000489612 999 ntBASIC16.53■□□□□ 0.24
H3F3AP84243 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.53■□□□□ 0.24
H3F3AP84243 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.53■□□□□ 0.24
H3F3AP84243 AC139887.4-201ENST00000607877 719 ntBASIC16.53■□□□□ 0.24
H3F3AP84243 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.53■□□□□ 0.24
H3F3AP84243 AC006011.2-201ENST00000621313 1158 ntBASIC16.53■□□□□ 0.24
H3F3AP84243 AC011558.1-201ENST00000623459 338 ntBASIC16.53■□□□□ 0.24
H3F3AP84243 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
H3F3AP84243 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
H3F3AP84243 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H3F3AP84243 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
H3F3AP84243 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
H3F3AP84243 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.53■□□□□ 0.24
H3F3AP84243 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.53■□□□□ 0.24
H3F3AP84243 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
H3F3AP84243 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H3F3AP84243 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.53■□□□□ 0.24
H3F3AP84243 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.53■□□□□ 0.24
H3F3AP84243 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H3F3AP84243 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.53■□□□□ 0.24
H3F3AP84243 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.53■□□□□ 0.24
H3F3AP84243 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.52■□□□□ 0.24
H3F3AP84243 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
H3F3AP84243 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
H3F3AP84243 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
H3F3AP84243 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.52■□□□□ 0.24
H3F3AP84243 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
H3F3AP84243 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
H3F3AP84243 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
H3F3AP84243 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.52■□□□□ 0.24
H3F3AP84243 AC104076.2-201ENST00000448912 469 ntBASIC16.52■□□□□ 0.24
H3F3AP84243 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.52■□□□□ 0.24
H3F3AP84243 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.52■□□□□ 0.24
H3F3AP84243 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
H3F3AP84243 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.52■□□□□ 0.24
H3F3AP84243 GCSHP2-201ENST00000560971 527 ntBASIC16.52■□□□□ 0.24
H3F3AP84243 AL441883.1-201ENST00000566170 1045 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms