Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
NKX6-1P78426 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-1P78426 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-1P78426 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-1P78426 AP000523.1-201ENST00000398242 1049 ntBASIC16.31■□□□□ 0.2
NKX6-1P78426 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-1P78426 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-1P78426 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-1P78426 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-1P78426 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.31■□□□□ 0.2
NKX6-1P78426 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.31■□□□□ 0.2
NKX6-1P78426 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.31■□□□□ 0.2
NKX6-1P78426 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.31■□□□□ 0.2
NKX6-1P78426 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.31■□□□□ 0.2
NKX6-1P78426 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-1P78426 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.31■□□□□ 0.2
NKX6-1P78426 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.31■□□□□ 0.2
NKX6-1P78426 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.31■□□□□ 0.2
NKX6-1P78426 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-1P78426 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NKX6-1P78426 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-1P78426 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-1P78426 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-1P78426 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-1P78426 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-1P78426 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
NKX6-1P78426 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NKX6-1P78426 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.31■□□□□ 0.2
NKX6-1P78426 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.31■□□□□ 0.2
NKX6-1P78426 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-1P78426 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
NKX6-1P78426 FEM1AP3-201ENST00000403722 1741 ntBASIC16.31■□□□□ 0.2
NKX6-1P78426 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-1P78426 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NKX6-1P78426 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.3■□□□□ 0.2
NKX6-1P78426 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NKX6-1P78426 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-1P78426 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.3■□□□□ 0.2
NKX6-1P78426 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-1P78426 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-1P78426 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-1P78426 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.3■□□□□ 0.2
NKX6-1P78426 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.3■□□□□ 0.2
NKX6-1P78426 KRT8P3-201ENST00000519669 1449 ntBASIC16.3■□□□□ 0.2
NKX6-1P78426 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-1P78426 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-1P78426 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-1P78426 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NKX6-1P78426 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.3■□□□□ 0.2
NKX6-1P78426 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.3■□□□□ 0.2
NKX6-1P78426 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-1P78426 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-1P78426 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-1P78426 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.3■□□□□ 0.2
NKX6-1P78426 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NKX6-1P78426 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.3■□□□□ 0.2
NKX6-1P78426 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.3■□□□□ 0.2
NKX6-1P78426 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.3■□□□□ 0.2
NKX6-1P78426 KRT18P38-201ENST00000449496 1282 ntBASIC16.3■□□□□ 0.2
NKX6-1P78426 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.3■□□□□ 0.2
NKX6-1P78426 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.3■□□□□ 0.2
NKX6-1P78426 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.3■□□□□ 0.2
NKX6-1P78426 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
NKX6-1P78426 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.3■□□□□ 0.2
NKX6-1P78426 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NKX6-1P78426 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.3■□□□□ 0.2
NKX6-1P78426 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NKX6-1P78426 IRX1P1-201ENST00000438849 1838 ntBASIC16.3■□□□□ 0.2
NKX6-1P78426 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.3■□□□□ 0.2
NKX6-1P78426 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-1P78426 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-1P78426 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-1P78426 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-1P78426 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-1P78426 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NKX6-1P78426 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-1P78426 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-1P78426 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-1P78426 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-1P78426 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NKX6-1P78426 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.29■□□□□ 0.2
NKX6-1P78426 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX6-1P78426 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.29■□□□□ 0.2
NKX6-1P78426 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX6-1P78426 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-1P78426 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-1P78426 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-1P78426 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
NKX6-1P78426 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NKX6-1P78426 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-1P78426 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.29■□□□□ 0.2
NKX6-1P78426 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-1P78426 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-1P78426 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-1P78426 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.29■□□□□ 0.2
NKX6-1P78426 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX6-1P78426 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-1P78426 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.29■□□□□ 0.2
NKX6-1P78426 AC112907.2-201ENST00000448639 330 ntBASIC16.29■□□□□ 0.2
NKX6-1P78426 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms