Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP1S1P61966 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP1S1P61966 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.61■□□□□ 0.57
AP1S1P61966 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP1S1P61966 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP1S1P61966 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AP1S1P61966 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
AP1S1P61966 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP1S1P61966 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.61■□□□□ 0.57
AP1S1P61966 AL671277.2-201ENST00000458060 996 ntBASIC18.61■□□□□ 0.57
AP1S1P61966 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.61■□□□□ 0.57
AP1S1P61966 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.61■□□□□ 0.57
AP1S1P61966 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP1S1P61966 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.61■□□□□ 0.57
AP1S1P61966 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
AP1S1P61966 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP1S1P61966 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP1S1P61966 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.61■□□□□ 0.57
AP1S1P61966 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP1S1P61966 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AP1S1P61966 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP1S1P61966 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.61■□□□□ 0.57
AP1S1P61966 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
AP1S1P61966 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP1S1P61966 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP1S1P61966 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
AP1S1P61966 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
AP1S1P61966 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP1S1P61966 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AP1S1P61966 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP1S1P61966 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AP1S1P61966 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AP1S1P61966 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
AP1S1P61966 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.6■□□□□ 0.57
AP1S1P61966 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP1S1P61966 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.6■□□□□ 0.57
AP1S1P61966 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.6■□□□□ 0.57
AP1S1P61966 AC126763.1-201ENST00000552015 2118 ntBASIC18.6■□□□□ 0.57
AP1S1P61966 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.6■□□□□ 0.57
AP1S1P61966 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.6■□□□□ 0.57
AP1S1P61966 AL136038.4-201ENST00000603606 1261 ntBASIC18.6■□□□□ 0.57
AP1S1P61966 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AP1S1P61966 AC004408.2-201ENST00000623613 2777 ntBASIC18.6■□□□□ 0.57
AP1S1P61966 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP1S1P61966 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AP1S1P61966 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.59■□□□□ 0.57
AP1S1P61966 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
AP1S1P61966 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
AP1S1P61966 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP1S1P61966 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP1S1P61966 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.59■□□□□ 0.57
AP1S1P61966 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP1S1P61966 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP1S1P61966 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.59■□□□□ 0.57
AP1S1P61966 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AP1S1P61966 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
AP1S1P61966 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP1S1P61966 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP1S1P61966 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP1S1P61966 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.59■□□□□ 0.57
AP1S1P61966 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.59■□□□□ 0.57
AP1S1P61966 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.59■□□□□ 0.57
AP1S1P61966 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.59■□□□□ 0.57
AP1S1P61966 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.59■□□□□ 0.57
AP1S1P61966 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.59■□□□□ 0.57
AP1S1P61966 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP1S1P61966 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.59■□□□□ 0.57
AP1S1P61966 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP1S1P61966 HYMAI.1-201ENST00000620949 238 ntBASIC18.59■□□□□ 0.57
AP1S1P61966 AC079602.3-201ENST00000623931 403 ntBASIC18.59■□□□□ 0.57
AP1S1P61966 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.59■□□□□ 0.57
AP1S1P61966 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP1S1P61966 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
AP1S1P61966 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP1S1P61966 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP1S1P61966 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP1S1P61966 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP1S1P61966 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AP1S1P61966 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
AP1S1P61966 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP1S1P61966 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
AP1S1P61966 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP1S1P61966 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
AP1S1P61966 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.58■□□□□ 0.57
AP1S1P61966 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
AP1S1P61966 WIZP1-201ENST00000531444 2299 ntBASIC18.58■□□□□ 0.57
AP1S1P61966 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
AP1S1P61966 LINC01311-201ENST00000565162 1445 ntBASIC18.58■□□□□ 0.57
AP1S1P61966 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
AP1S1P61966 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
AP1S1P61966 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.58■□□□□ 0.57
AP1S1P61966 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
AP1S1P61966 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
AP1S1P61966 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
AP1S1P61966 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
AP1S1P61966 SDHAP2-201ENST00000455183 2001 ntBASIC18.58■□□□□ 0.56
AP1S1P61966 AL391807.1-203ENST00000604392 2365 ntBASIC18.58■□□□□ 0.56
AP1S1P61966 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP1S1P61966 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
AP1S1P61966 HBZP1-201ENST00000354915 429 ntBASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms