Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC24.67■■□□□ 1.54
ZC3H6P61129 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC24.67■■□□□ 1.54
ZC3H6P61129 PAM16-208ENST00000573553 722 ntTSL 2 BASIC24.67■■□□□ 1.54
ZC3H6P61129 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ZC3H6P61129 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ZC3H6P61129 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC24.67■■□□□ 1.54
ZC3H6P61129 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ZC3H6P61129 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
ZC3H6P61129 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
ZC3H6P61129 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC24.67■■□□□ 1.54
ZC3H6P61129 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC24.67■■□□□ 1.54
ZC3H6P61129 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC24.66■■□□□ 1.54
ZC3H6P61129 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC24.66■■□□□ 1.54
ZC3H6P61129 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC24.66■■□□□ 1.54
ZC3H6P61129 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZC3H6P61129 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
ZC3H6P61129 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ZC3H6P61129 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZC3H6P61129 CSF3-203ENST00000394148 622 ntTSL 3 BASIC24.66■■□□□ 1.54
ZC3H6P61129 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC24.66■■□□□ 1.54
ZC3H6P61129 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC24.66■■□□□ 1.54
ZC3H6P61129 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC24.66■■□□□ 1.54
ZC3H6P61129 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC24.66■■□□□ 1.54
ZC3H6P61129 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZC3H6P61129 AL691403.2-201ENST00000618460 490 ntBASIC24.66■■□□□ 1.54
ZC3H6P61129 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC24.66■■□□□ 1.54
ZC3H6P61129 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ZC3H6P61129 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZC3H6P61129 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
ZC3H6P61129 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZC3H6P61129 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ZC3H6P61129 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
ZC3H6P61129 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZC3H6P61129 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZC3H6P61129 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ZC3H6P61129 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
ZC3H6P61129 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC24.65■■□□□ 1.54
ZC3H6P61129 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ZC3H6P61129 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ZC3H6P61129 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
ZC3H6P61129 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC24.65■■□□□ 1.54
ZC3H6P61129 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC24.65■■□□□ 1.54
ZC3H6P61129 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC24.65■■□□□ 1.54
ZC3H6P61129 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ZC3H6P61129 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC24.65■■□□□ 1.54
ZC3H6P61129 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC24.65■■□□□ 1.54
ZC3H6P61129 AC141586.3-201ENST00000562166 1838 ntBASIC24.65■■□□□ 1.54
ZC3H6P61129 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC24.65■■□□□ 1.54
ZC3H6P61129 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
ZC3H6P61129 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
ZC3H6P61129 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ZC3H6P61129 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
ZC3H6P61129 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC24.64■■□□□ 1.54
ZC3H6P61129 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
ZC3H6P61129 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
ZC3H6P61129 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ZC3H6P61129 AC104109.2-201ENST00000602919 1418 ntBASIC24.64■■□□□ 1.54
ZC3H6P61129 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ZC3H6P61129 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
ZC3H6P61129 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC24.64■■□□□ 1.54
ZC3H6P61129 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC24.64■■□□□ 1.54
ZC3H6P61129 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
ZC3H6P61129 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
ZC3H6P61129 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
ZC3H6P61129 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC24.64■■□□□ 1.53
ZC3H6P61129 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC24.64■■□□□ 1.53
ZC3H6P61129 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
ZC3H6P61129 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ZC3H6P61129 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
ZC3H6P61129 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
ZC3H6P61129 NFYC-AS1-201ENST00000606277 1687 ntBASIC24.63■■□□□ 1.53
ZC3H6P61129 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
ZC3H6P61129 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
ZC3H6P61129 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ZC3H6P61129 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ZC3H6P61129 DDT-203ENST00000403754 569 ntTSL 3 BASIC24.63■■□□□ 1.53
ZC3H6P61129 RBM17P3-201ENST00000417687 1192 ntBASIC24.63■■□□□ 1.53
ZC3H6P61129 DDT-206ENST00000430101 573 ntTSL 2 BASIC24.63■■□□□ 1.53
ZC3H6P61129 AC068472.1-201ENST00000474589 881 ntBASIC24.63■■□□□ 1.53
ZC3H6P61129 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC24.63■■□□□ 1.53
ZC3H6P61129 IGHV3-22-201ENST00000520721 359 ntBASIC24.63■■□□□ 1.53
ZC3H6P61129 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC24.63■■□□□ 1.53
ZC3H6P61129 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC24.63■■□□□ 1.53
ZC3H6P61129 COX5A-204ENST00000567270 579 ntTSL 3 BASIC24.63■■□□□ 1.53
ZC3H6P61129 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
ZC3H6P61129 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
ZC3H6P61129 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
ZC3H6P61129 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
ZC3H6P61129 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
ZC3H6P61129 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
ZC3H6P61129 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
ZC3H6P61129 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC24.62■■□□□ 1.53
ZC3H6P61129 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
ZC3H6P61129 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
ZC3H6P61129 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ZC3H6P61129 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
ZC3H6P61129 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC24.62■■□□□ 1.53
ZC3H6P61129 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
ZC3H6P61129 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
ZC3H6P61129 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms