Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB5BP61020 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB5BP61020 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
RAB5BP61020 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB5BP61020 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RAB5BP61020 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.54□□□□□ -0.08
RAB5BP61020 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB5BP61020 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB5BP61020 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB5BP61020 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB5BP61020 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
RAB5BP61020 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RAB5BP61020 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 PCDHA14-201ENST00000506751 2298 ntBASIC14.53□□□□□ -0.08
RAB5BP61020 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB5BP61020 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB5BP61020 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB5BP61020 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB5BP61020 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RAB5BP61020 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB5BP61020 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB5BP61020 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RAB5BP61020 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
RAB5BP61020 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB5BP61020 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB5BP61020 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB5BP61020 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
RAB5BP61020 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.52□□□□□ -0.08
RAB5BP61020 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB5BP61020 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.52□□□□□ -0.08
RAB5BP61020 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB5BP61020 AP001271.2-201ENST00000624018 1556 ntBASIC14.52□□□□□ -0.08
RAB5BP61020 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB5BP61020 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB5BP61020 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.52□□□□□ -0.08
RAB5BP61020 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
RAB5BP61020 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
RAB5BP61020 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.52□□□□□ -0.08
RAB5BP61020 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.52□□□□□ -0.08
RAB5BP61020 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RAB5BP61020 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC14.52□□□□□ -0.09
RAB5BP61020 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB5BP61020 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB5BP61020 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.52□□□□□ -0.09
RAB5BP61020 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB5BP61020 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB5BP61020 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RAB5BP61020 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
RAB5BP61020 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB5BP61020 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB5BP61020 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB5BP61020 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB5BP61020 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB5BP61020 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB5BP61020 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
RAB5BP61020 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB5BP61020 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB5BP61020 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB5BP61020 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB5BP61020 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB5BP61020 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
RAB5BP61020 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
RAB5BP61020 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RAB5BP61020 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB5BP61020 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB5BP61020 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB5BP61020 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB5BP61020 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB5BP61020 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB5BP61020 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB5BP61020 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB5BP61020 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB5BP61020 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB5BP61020 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB5BP61020 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms