Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ERVFC1P60507 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ERVFC1P60507 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.45■□□□□ 0.7
ERVFC1P60507 RCN1P2-201ENST00000398357 915 ntBASIC19.45■□□□□ 0.7
ERVFC1P60507 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ERVFC1P60507 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.45■□□□□ 0.7
ERVFC1P60507 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
ERVFC1P60507 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ERVFC1P60507 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.45■□□□□ 0.7
ERVFC1P60507 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
ERVFC1P60507 POLD2P1-201ENST00000511220 997 ntBASIC19.45■□□□□ 0.7
ERVFC1P60507 KRT18P58-201ENST00000527480 1120 ntBASIC19.45■□□□□ 0.7
ERVFC1P60507 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.45■□□□□ 0.7
ERVFC1P60507 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.45■□□□□ 0.7
ERVFC1P60507 AC106730.1-201ENST00000566722 1090 ntBASIC19.45■□□□□ 0.7
ERVFC1P60507 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ERVFC1P60507 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.45■□□□□ 0.7
ERVFC1P60507 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ERVFC1P60507 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.45■□□□□ 0.7
ERVFC1P60507 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ERVFC1P60507 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
ERVFC1P60507 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.45■□□□□ 0.7
ERVFC1P60507 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ERVFC1P60507 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ERVFC1P60507 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ERVFC1P60507 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
ERVFC1P60507 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.45■□□□□ 0.7
ERVFC1P60507 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.45■□□□□ 0.7
ERVFC1P60507 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ERVFC1P60507 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ERVFC1P60507 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERVFC1P60507 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
ERVFC1P60507 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
ERVFC1P60507 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERVFC1P60507 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.44■□□□□ 0.7
ERVFC1P60507 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERVFC1P60507 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ERVFC1P60507 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERVFC1P60507 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERVFC1P60507 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERVFC1P60507 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERVFC1P60507 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ERVFC1P60507 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.44■□□□□ 0.7
ERVFC1P60507 AC018712.1-201ENST00000455767 687 ntBASIC19.44■□□□□ 0.7
ERVFC1P60507 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.44■□□□□ 0.7
ERVFC1P60507 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ERVFC1P60507 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.44■□□□□ 0.7
ERVFC1P60507 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.44■□□□□ 0.7
ERVFC1P60507 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERVFC1P60507 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.44■□□□□ 0.7
ERVFC1P60507 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERVFC1P60507 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ERVFC1P60507 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERVFC1P60507 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERVFC1P60507 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERVFC1P60507 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERVFC1P60507 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ERVFC1P60507 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERVFC1P60507 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ERVFC1P60507 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.43■□□□□ 0.7
ERVFC1P60507 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.43■□□□□ 0.7
ERVFC1P60507 AC099343.3-201ENST00000605834 2503 ntBASIC19.43■□□□□ 0.7
ERVFC1P60507 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ERVFC1P60507 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.43■□□□□ 0.7
ERVFC1P60507 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ERVFC1P60507 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ERVFC1P60507 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ERVFC1P60507 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.43■□□□□ 0.7
ERVFC1P60507 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.43■□□□□ 0.7
ERVFC1P60507 RNPS1P1-201ENST00000507437 918 ntBASIC19.43■□□□□ 0.7
ERVFC1P60507 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.43■□□□□ 0.7
ERVFC1P60507 KRT18P41-201ENST00000518924 1277 ntBASIC19.43■□□□□ 0.7
ERVFC1P60507 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.43■□□□□ 0.7
ERVFC1P60507 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.43■□□□□ 0.7
ERVFC1P60507 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ERVFC1P60507 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERVFC1P60507 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERVFC1P60507 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERVFC1P60507 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ERVFC1P60507 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERVFC1P60507 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.43■□□□□ 0.7
ERVFC1P60507 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ERVFC1P60507 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERVFC1P60507 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERVFC1P60507 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERVFC1P60507 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.42■□□□□ 0.7
ERVFC1P60507 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERVFC1P60507 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.42■□□□□ 0.7
ERVFC1P60507 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ERVFC1P60507 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ERVFC1P60507 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERVFC1P60507 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.42■□□□□ 0.7
ERVFC1P60507 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.42■□□□□ 0.7
ERVFC1P60507 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ERVFC1P60507 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ERVFC1P60507 AC093909.1-201ENST00000504731 1122 ntBASIC19.42■□□□□ 0.7
ERVFC1P60507 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERVFC1P60507 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.42■□□□□ 0.7
ERVFC1P60507 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.42■□□□□ 0.7
ERVFC1P60507 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms