Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM11AP58511 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM11AP58511 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM11AP58511 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SMIM11AP58511 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM11AP58511 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.09■□□□□ 0.33
SMIM11AP58511 AC004951.3-201ENST00000418645 1148 ntBASIC17.09■□□□□ 0.33
SMIM11AP58511 NIFKP9-201ENST00000419265 221 ntBASIC17.09■□□□□ 0.33
SMIM11AP58511 AC004980.1-204ENST00000429707 299 ntBASIC17.09■□□□□ 0.33
SMIM11AP58511 AC026366.1-201ENST00000488803 879 ntBASIC17.09■□□□□ 0.33
SMIM11AP58511 KRT18P41-201ENST00000518924 1277 ntBASIC17.09■□□□□ 0.33
SMIM11AP58511 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.09■□□□□ 0.33
SMIM11AP58511 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.09■□□□□ 0.33
SMIM11AP58511 AC104771.1-201ENST00000603335 964 ntBASIC17.09■□□□□ 0.33
SMIM11AP58511 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.09■□□□□ 0.33
SMIM11AP58511 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SMIM11AP58511 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.09■□□□□ 0.33
SMIM11AP58511 AL023875.1-201ENST00000640777 796 ntBASIC17.09■□□□□ 0.33
SMIM11AP58511 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.09■□□□□ 0.33
SMIM11AP58511 RCC2P3-201ENST00000418112 1537 ntBASIC17.09■□□□□ 0.33
SMIM11AP58511 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM11AP58511 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SMIM11AP58511 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.09■□□□□ 0.33
SMIM11AP58511 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM11AP58511 AC138028.4-201ENST00000564984 1845 ntBASIC17.09■□□□□ 0.33
SMIM11AP58511 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SMIM11AP58511 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SMIM11AP58511 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM11AP58511 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM11AP58511 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM11AP58511 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM11AP58511 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMIM11AP58511 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMIM11AP58511 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMIM11AP58511 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
SMIM11AP58511 AP000997.3-201ENST00000623333 2250 ntBASIC17.08■□□□□ 0.33
SMIM11AP58511 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
SMIM11AP58511 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.08■□□□□ 0.33
SMIM11AP58511 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMIM11AP58511 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
SMIM11AP58511 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
SMIM11AP58511 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM11AP58511 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM11AP58511 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SMIM11AP58511 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM11AP58511 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM11AP58511 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM11AP58511 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM11AP58511 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM11AP58511 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM11AP58511 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SMIM11AP58511 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
SMIM11AP58511 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.08■□□□□ 0.32
SMIM11AP58511 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM11AP58511 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM11AP58511 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SMIM11AP58511 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM11AP58511 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM11AP58511 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.08■□□□□ 0.32
SMIM11AP58511 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM11AP58511 ESPNP-201ENST00000270691 2015 ntBASIC17.08■□□□□ 0.32
SMIM11AP58511 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM11AP58511 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM11AP58511 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.07■□□□□ 0.32
SMIM11AP58511 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
SMIM11AP58511 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM11AP58511 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SMIM11AP58511 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM11AP58511 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.07■□□□□ 0.32
SMIM11AP58511 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM11AP58511 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.07■□□□□ 0.32
SMIM11AP58511 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM11AP58511 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM11AP58511 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM11AP58511 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM11AP58511 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM11AP58511 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SMIM11AP58511 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM11AP58511 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SMIM11AP58511 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM11AP58511 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SMIM11AP58511 AP000593.1-201ENST00000393668 712 ntBASIC17.07■□□□□ 0.32
SMIM11AP58511 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.07■□□□□ 0.32
SMIM11AP58511 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SMIM11AP58511 KSR1P1-201ENST00000446298 240 ntBASIC17.07■□□□□ 0.32
SMIM11AP58511 AC091390.4-202ENST00000476426 537 ntBASIC17.07■□□□□ 0.32
SMIM11AP58511 AP002982.1-201ENST00000492365 877 ntBASIC17.07■□□□□ 0.32
SMIM11AP58511 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.07■□□□□ 0.32
SMIM11AP58511 AL353708.3-201ENST00000610272 989 ntBASIC17.07■□□□□ 0.32
SMIM11AP58511 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.07■□□□□ 0.32
SMIM11AP58511 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM11AP58511 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
SMIM11AP58511 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM11AP58511 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.07■□□□□ 0.32
SMIM11AP58511 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM11AP58511 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.07■□□□□ 0.32
SMIM11AP58511 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.07■□□□□ 0.32
SMIM11AP58511 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM11AP58511 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM11AP58511 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms