Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB38P57729 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB38P57729 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.39■□□□□ 0.37
RAB38P57729 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.39■□□□□ 0.37
RAB38P57729 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB38P57729 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB38P57729 AC009102.3-201ENST00000623118 1491 ntBASIC17.39■□□□□ 0.37
RAB38P57729 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB38P57729 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RAB38P57729 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RAB38P57729 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB38P57729 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB38P57729 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB38P57729 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB38P57729 SPDYE15P-201ENST00000424157 909 ntBASIC17.39■□□□□ 0.37
RAB38P57729 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB38P57729 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB38P57729 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB38P57729 AL049597.2-201ENST00000565575 961 ntBASIC17.39■□□□□ 0.37
RAB38P57729 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.39■□□□□ 0.37
RAB38P57729 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.39■□□□□ 0.37
RAB38P57729 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.39■□□□□ 0.37
RAB38P57729 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.39■□□□□ 0.37
RAB38P57729 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RAB38P57729 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB38P57729 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB38P57729 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB38P57729 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
RAB38P57729 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB38P57729 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB38P57729 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB38P57729 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RAB38P57729 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB38P57729 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB38P57729 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB38P57729 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB38P57729 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB38P57729 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RAB38P57729 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB38P57729 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB38P57729 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB38P57729 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.38■□□□□ 0.37
RAB38P57729 FAM8A6P-201ENST00000407496 1135 ntBASIC17.38■□□□□ 0.37
RAB38P57729 AL359075.1-203ENST00000462729 1002 ntBASIC17.38■□□□□ 0.37
RAB38P57729 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.38■□□□□ 0.37
RAB38P57729 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB38P57729 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.38■□□□□ 0.37
RAB38P57729 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB38P57729 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
RAB38P57729 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
RAB38P57729 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB38P57729 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RAB38P57729 RNF165-205ENST00000588679 2904 ntBASIC17.38■□□□□ 0.37
RAB38P57729 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
RAB38P57729 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB38P57729 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB38P57729 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB38P57729 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RAB38P57729 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB38P57729 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB38P57729 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB38P57729 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.37■□□□□ 0.37
RAB38P57729 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB38P57729 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.37■□□□□ 0.37
RAB38P57729 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.37■□□□□ 0.37
RAB38P57729 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB38P57729 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.37■□□□□ 0.37
RAB38P57729 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB38P57729 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB38P57729 KRT18P38-201ENST00000449496 1282 ntBASIC17.37■□□□□ 0.37
RAB38P57729 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB38P57729 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.37■□□□□ 0.37
RAB38P57729 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.37■□□□□ 0.37
RAB38P57729 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB38P57729 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
RAB38P57729 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB38P57729 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB38P57729 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB38P57729 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB38P57729 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB38P57729 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB38P57729 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB38P57729 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.36■□□□□ 0.37
RAB38P57729 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RAB38P57729 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB38P57729 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB38P57729 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB38P57729 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RAB38P57729 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.36■□□□□ 0.37
RAB38P57729 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB38P57729 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB38P57729 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB38P57729 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB38P57729 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB38P57729 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB38P57729 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.36■□□□□ 0.37
RAB38P57729 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.36■□□□□ 0.37
RAB38P57729 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.36■□□□□ 0.37
RAB38P57729 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RAB38P57729 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms