Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.25■□□□□ 0.83
CDR1P51861 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CDR1P51861 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDR1P51861 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDR1P51861 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDR1P51861 AC092338.2-201ENST00000568827 1415 ntBASIC20.25■□□□□ 0.83
CDR1P51861 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CDR1P51861 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDR1P51861 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CDR1P51861 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDR1P51861 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.25■□□□□ 0.83
CDR1P51861 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.25■□□□□ 0.83
CDR1P51861 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDR1P51861 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDR1P51861 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDR1P51861 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.24■□□□□ 0.83
CDR1P51861 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.24■□□□□ 0.83
CDR1P51861 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDR1P51861 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDR1P51861 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDR1P51861 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.24■□□□□ 0.83
CDR1P51861 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CDR1P51861 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDR1P51861 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDR1P51861 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CDR1P51861 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDR1P51861 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CDR1P51861 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.24■□□□□ 0.83
CDR1P51861 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.24■□□□□ 0.83
CDR1P51861 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.24■□□□□ 0.83
CDR1P51861 AC139887.4-201ENST00000607877 719 ntBASIC20.24■□□□□ 0.83
CDR1P51861 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.24■□□□□ 0.83
CDR1P51861 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
CDR1P51861 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDR1P51861 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDR1P51861 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDR1P51861 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDR1P51861 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.24■□□□□ 0.83
CDR1P51861 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDR1P51861 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDR1P51861 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDR1P51861 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.23■□□□□ 0.83
CDR1P51861 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDR1P51861 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDR1P51861 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CDR1P51861 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CDR1P51861 KRT8P45-201ENST00000414328 1447 ntBASIC20.23■□□□□ 0.83
CDR1P51861 CCR12P-201ENST00000446203 998 ntBASIC20.23■□□□□ 0.83
CDR1P51861 DUX4L26-201ENST00000489078 1255 ntBASIC20.23■□□□□ 0.83
CDR1P51861 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
CDR1P51861 NTF6B-201ENST00000591913 560 ntBASIC20.23■□□□□ 0.83
CDR1P51861 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDR1P51861 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.23■□□□□ 0.83
CDR1P51861 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDR1P51861 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CDR1P51861 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDR1P51861 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CDR1P51861 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDR1P51861 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.23■□□□□ 0.83
CDR1P51861 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.23■□□□□ 0.83
CDR1P51861 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDR1P51861 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDR1P51861 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDR1P51861 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CDR1P51861 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
CDR1P51861 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDR1P51861 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDR1P51861 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDR1P51861 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.22■□□□□ 0.83
CDR1P51861 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CDR1P51861 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CDR1P51861 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDR1P51861 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.22■□□□□ 0.83
CDR1P51861 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.22■□□□□ 0.83
CDR1P51861 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDR1P51861 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.22■□□□□ 0.83
CDR1P51861 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.22■□□□□ 0.83
CDR1P51861 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDR1P51861 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.22■□□□□ 0.83
CDR1P51861 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.22■□□□□ 0.83
CDR1P51861 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.22■□□□□ 0.83
CDR1P51861 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDR1P51861 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDR1P51861 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDR1P51861 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
CDR1P51861 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDR1P51861 TEX21P-204ENST00000641479 1693 ntBASIC20.22■□□□□ 0.83
CDR1P51861 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.22■□□□□ 0.83
CDR1P51861 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDR1P51861 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.22■□□□□ 0.83
CDR1P51861 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.22■□□□□ 0.83
CDR1P51861 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDR1P51861 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDR1P51861 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDR1P51861 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDR1P51861 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDR1P51861 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDR1P51861 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.21■□□□□ 0.83
CDR1P51861 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDR1P51861 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms