Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KRT6CP48668 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KRT6CP48668 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KRT6CP48668 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.98■□□□□ 0.47
KRT6CP48668 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.98■□□□□ 0.47
KRT6CP48668 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.98■□□□□ 0.47
KRT6CP48668 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KRT6CP48668 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KRT6CP48668 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.98■□□□□ 0.47
KRT6CP48668 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRT6CP48668 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
KRT6CP48668 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRT6CP48668 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
KRT6CP48668 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRT6CP48668 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
KRT6CP48668 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KRT6CP48668 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRT6CP48668 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRT6CP48668 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.97■□□□□ 0.47
KRT6CP48668 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.97■□□□□ 0.47
KRT6CP48668 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.97■□□□□ 0.47
KRT6CP48668 AC012618.2-201ENST00000428058 849 ntBASIC17.97■□□□□ 0.47
KRT6CP48668 MFAP1P1-201ENST00000442257 1255 ntBASIC17.97■□□□□ 0.47
KRT6CP48668 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.97■□□□□ 0.47
KRT6CP48668 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.97■□□□□ 0.47
KRT6CP48668 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
KRT6CP48668 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRT6CP48668 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
KRT6CP48668 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KRT6CP48668 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KRT6CP48668 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRT6CP48668 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT6CP48668 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.96■□□□□ 0.47
KRT6CP48668 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT6CP48668 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KRT6CP48668 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.96■□□□□ 0.47
KRT6CP48668 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.96■□□□□ 0.47
KRT6CP48668 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
KRT6CP48668 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.96■□□□□ 0.47
KRT6CP48668 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KRT6CP48668 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.96■□□□□ 0.47
KRT6CP48668 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.96■□□□□ 0.47
KRT6CP48668 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT6CP48668 ABHD17AP1-201ENST00000358206 933 ntBASIC17.96■□□□□ 0.47
KRT6CP48668 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT6CP48668 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.96■□□□□ 0.47
KRT6CP48668 GCSHP5-201ENST00000443090 522 ntBASIC17.96■□□□□ 0.47
KRT6CP48668 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.96■□□□□ 0.47
KRT6CP48668 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT6CP48668 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT6CP48668 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT6CP48668 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.96■□□□□ 0.47
KRT6CP48668 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
KRT6CP48668 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT6CP48668 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT6CP48668 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.96■□□□□ 0.47
KRT6CP48668 AC008556.1-201ENST00000610908 2040 ntBASIC17.96■□□□□ 0.47
KRT6CP48668 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KRT6CP48668 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
KRT6CP48668 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6CP48668 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6CP48668 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6CP48668 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6CP48668 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.95■□□□□ 0.46
KRT6CP48668 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6CP48668 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.95■□□□□ 0.46
KRT6CP48668 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
KRT6CP48668 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6CP48668 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
KRT6CP48668 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6CP48668 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6CP48668 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6CP48668 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6CP48668 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6CP48668 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
KRT6CP48668 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6CP48668 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6CP48668 MCCD1P1-208ENST00000445732 328 ntBASIC17.95■□□□□ 0.46
KRT6CP48668 AC098590.1-201ENST00000468126 897 ntBASIC17.95■□□□□ 0.46
KRT6CP48668 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.95■□□□□ 0.46
KRT6CP48668 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.95■□□□□ 0.46
KRT6CP48668 AC097488.1-201ENST00000507834 756 ntBASIC17.95■□□□□ 0.46
KRT6CP48668 KRT18P41-201ENST00000518924 1277 ntBASIC17.95■□□□□ 0.46
KRT6CP48668 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.95■□□□□ 0.46
KRT6CP48668 AC233702.5-201ENST00000584107 538 ntBASIC17.95■□□□□ 0.46
KRT6CP48668 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.95■□□□□ 0.46
KRT6CP48668 AC008622.2-201ENST00000617006 1229 ntBASIC17.95■□□□□ 0.46
KRT6CP48668 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6CP48668 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
KRT6CP48668 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6CP48668 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
KRT6CP48668 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6CP48668 NOC2LP1-202ENST00000452600 2235 ntBASIC17.95■□□□□ 0.46
KRT6CP48668 MYLKP1-201ENST00000509077 1580 ntBASIC17.95■□□□□ 0.46
KRT6CP48668 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
KRT6CP48668 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6CP48668 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6CP48668 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6CP48668 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT6CP48668 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms