Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX3P48380 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.41■□□□□ 0.38
RFX3P48380 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.41■□□□□ 0.38
RFX3P48380 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFX3P48380 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX3P48380 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.41■□□□□ 0.38
RFX3P48380 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.41■□□□□ 0.38
RFX3P48380 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX3P48380 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX3P48380 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.41■□□□□ 0.38
RFX3P48380 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.41■□□□□ 0.38
RFX3P48380 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.41■□□□□ 0.38
RFX3P48380 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX3P48380 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
RFX3P48380 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFX3P48380 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RFX3P48380 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX3P48380 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.4■□□□□ 0.38
RFX3P48380 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
RFX3P48380 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX3P48380 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.4■□□□□ 0.38
RFX3P48380 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX3P48380 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX3P48380 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX3P48380 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.4■□□□□ 0.38
RFX3P48380 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX3P48380 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX3P48380 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX3P48380 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.4■□□□□ 0.38
RFX3P48380 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.4■□□□□ 0.38
RFX3P48380 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFX3P48380 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.4■□□□□ 0.38
RFX3P48380 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
RFX3P48380 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.4■□□□□ 0.38
RFX3P48380 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.4■□□□□ 0.38
RFX3P48380 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX3P48380 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX3P48380 AC104581.1-202ENST00000635932 2618 ntBASIC17.4■□□□□ 0.38
RFX3P48380 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFX3P48380 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX3P48380 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.4■□□□□ 0.38
RFX3P48380 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.4■□□□□ 0.38
RFX3P48380 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX3P48380 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFX3P48380 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.4■□□□□ 0.38
RFX3P48380 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RFX3P48380 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
RFX3P48380 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX3P48380 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX3P48380 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX3P48380 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFX3P48380 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX3P48380 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.39■□□□□ 0.37
RFX3P48380 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RFX3P48380 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFX3P48380 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
RFX3P48380 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX3P48380 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RFX3P48380 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RFX3P48380 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFX3P48380 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX3P48380 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.39■□□□□ 0.37
RFX3P48380 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.39■□□□□ 0.37
RFX3P48380 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
RFX3P48380 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFX3P48380 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX3P48380 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.39■□□□□ 0.37
RFX3P48380 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFX3P48380 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX3P48380 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX3P48380 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX3P48380 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFX3P48380 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX3P48380 HEIH-201ENST00000623091 1652 ntBASIC17.39■□□□□ 0.37
RFX3P48380 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX3P48380 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.38■□□□□ 0.37
RFX3P48380 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.38■□□□□ 0.37
RFX3P48380 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX3P48380 ANO7L1-203ENST00000602586 1720 ntBASIC17.38■□□□□ 0.37
RFX3P48380 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RFX3P48380 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX3P48380 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX3P48380 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RFX3P48380 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
RFX3P48380 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX3P48380 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RFX3P48380 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RFX3P48380 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX3P48380 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX3P48380 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.38■□□□□ 0.37
RFX3P48380 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.38■□□□□ 0.37
RFX3P48380 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.38■□□□□ 0.37
RFX3P48380 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RFX3P48380 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.38■□□□□ 0.37
RFX3P48380 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.38■□□□□ 0.37
RFX3P48380 FITM1-202ENST00000559294 800 ntBASIC17.38■□□□□ 0.37
RFX3P48380 AP005242.2-201ENST00000580065 1175 ntBASIC17.38■□□□□ 0.37
RFX3P48380 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX3P48380 AC008622.2-201ENST00000617006 1229 ntBASIC17.38■□□□□ 0.37
RFX3P48380 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms