Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC6A12P48065 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A12P48065 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC6A12P48065 NOC2LP1-202ENST00000452600 2235 ntBASIC17.86■□□□□ 0.45
SLC6A12P48065 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A12P48065 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A12P48065 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A12P48065 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC6A12P48065 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A12P48065 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A12P48065 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A12P48065 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SLC6A12P48065 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A12P48065 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A12P48065 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A12P48065 AC009947.2-201ENST00000444014 672 ntBASIC17.86■□□□□ 0.45
SLC6A12P48065 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC6A12P48065 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC6A12P48065 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A12P48065 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A12P48065 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.86■□□□□ 0.45
SLC6A12P48065 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.86■□□□□ 0.45
SLC6A12P48065 AL512604.3-201ENST00000569583 964 ntBASIC17.86■□□□□ 0.45
SLC6A12P48065 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC6A12P48065 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SLC6A12P48065 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A12P48065 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A12P48065 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.86■□□□□ 0.45
SLC6A12P48065 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A12P48065 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A12P48065 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A12P48065 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A12P48065 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SLC6A12P48065 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A12P48065 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A12P48065 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A12P48065 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SLC6A12P48065 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
SLC6A12P48065 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC6A12P48065 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A12P48065 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SLC6A12P48065 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
SLC6A12P48065 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.85■□□□□ 0.45
SLC6A12P48065 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC6A12P48065 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SLC6A12P48065 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC6A12P48065 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC6A12P48065 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC6A12P48065 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC6A12P48065 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC6A12P48065 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SLC6A12P48065 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC6A12P48065 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC6A12P48065 KRT18P22-201ENST00000402024 1347 ntBASIC17.85■□□□□ 0.45
SLC6A12P48065 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.85■□□□□ 0.45
SLC6A12P48065 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SLC6A12P48065 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC6A12P48065 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.85■□□□□ 0.45
SLC6A12P48065 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.85■□□□□ 0.45
SLC6A12P48065 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
SLC6A12P48065 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.85■□□□□ 0.45
SLC6A12P48065 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC6A12P48065 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.85■□□□□ 0.45
SLC6A12P48065 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.85■□□□□ 0.45
SLC6A12P48065 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC6A12P48065 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.85■□□□□ 0.45
SLC6A12P48065 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC6A12P48065 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SLC6A12P48065 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC6A12P48065 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SLC6A12P48065 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC6A12P48065 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SLC6A12P48065 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC6A12P48065 GMCL1P1-201ENST00000463439 1581 ntBASIC17.84■□□□□ 0.45
SLC6A12P48065 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC6A12P48065 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC6A12P48065 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC6A12P48065 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC6A12P48065 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC6A12P48065 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.84■□□□□ 0.45
SLC6A12P48065 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.84■□□□□ 0.45
SLC6A12P48065 SEC1P-202ENST00000473944 940 ntBASIC17.84■□□□□ 0.45
SLC6A12P48065 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC6A12P48065 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC6A12P48065 NEK4P2-201ENST00000580004 1012 ntBASIC17.84■□□□□ 0.45
SLC6A12P48065 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC6A12P48065 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
SLC6A12P48065 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.84■□□□□ 0.45
SLC6A12P48065 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC6A12P48065 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC6A12P48065 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SLC6A12P48065 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.84■□□□□ 0.45
SLC6A12P48065 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC6A12P48065 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC6A12P48065 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC6A12P48065 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC6A12P48065 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.84■□□□□ 0.45
SLC6A12P48065 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC6A12P48065 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC6A12P48065 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms