Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GRIA1P42261 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GRIA1P42261 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
GRIA1P42261 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GRIA1P42261 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.79■□□□□ 0.6
GRIA1P42261 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GRIA1P42261 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
GRIA1P42261 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GRIA1P42261 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GRIA1P42261 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.78■□□□□ 0.6
GRIA1P42261 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GRIA1P42261 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.78■□□□□ 0.6
GRIA1P42261 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GRIA1P42261 KRT8P50-201ENST00000562022 1438 ntBASIC18.78■□□□□ 0.6
GRIA1P42261 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GRIA1P42261 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GRIA1P42261 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.78■□□□□ 0.6
GRIA1P42261 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.78■□□□□ 0.6
GRIA1P42261 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GRIA1P42261 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
GRIA1P42261 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.78■□□□□ 0.6
GRIA1P42261 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GRIA1P42261 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GRIA1P42261 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GRIA1P42261 AC036111.1-201ENST00000533973 1582 ntBASIC18.77■□□□□ 0.6
GRIA1P42261 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
GRIA1P42261 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GRIA1P42261 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GRIA1P42261 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.77■□□□□ 0.6
GRIA1P42261 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GRIA1P42261 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GRIA1P42261 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GRIA1P42261 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
GRIA1P42261 TSPY15P-201ENST00000457163 923 ntBASIC18.77■□□□□ 0.6
GRIA1P42261 SNORA78-201ENST00000459373 127 ntBASIC18.77■□□□□ 0.6
GRIA1P42261 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GRIA1P42261 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GRIA1P42261 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GRIA1P42261 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.77■□□□□ 0.6
GRIA1P42261 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.77■□□□□ 0.6
GRIA1P42261 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GRIA1P42261 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
GRIA1P42261 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.77■□□□□ 0.59
GRIA1P42261 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
GRIA1P42261 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
GRIA1P42261 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
GRIA1P42261 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GRIA1P42261 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GRIA1P42261 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
GRIA1P42261 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.76■□□□□ 0.59
GRIA1P42261 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GRIA1P42261 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GRIA1P42261 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GRIA1P42261 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
GRIA1P42261 UNC93B2-201ENST00000285383 730 ntBASIC18.76■□□□□ 0.59
GRIA1P42261 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.76■□□□□ 0.59
GRIA1P42261 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.76■□□□□ 0.59
GRIA1P42261 AP003041.3-201ENST00000527151 707 ntBASIC18.76■□□□□ 0.59
GRIA1P42261 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.76■□□□□ 0.59
GRIA1P42261 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.76■□□□□ 0.59
GRIA1P42261 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.76■□□□□ 0.59
GRIA1P42261 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GRIA1P42261 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GRIA1P42261 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
GRIA1P42261 PCDHB18P-201ENST00000524813 2368 ntBASIC18.76■□□□□ 0.59
GRIA1P42261 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GRIA1P42261 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GRIA1P42261 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GRIA1P42261 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.75■□□□□ 0.59
GRIA1P42261 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GRIA1P42261 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
GRIA1P42261 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GRIA1P42261 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GRIA1P42261 AC034236.2-201ENST00000606662 1610 ntBASIC18.75■□□□□ 0.59
GRIA1P42261 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
GRIA1P42261 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GRIA1P42261 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GRIA1P42261 MIR718-201ENST00000390190 70 ntBASIC18.75■□□□□ 0.59
GRIA1P42261 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
GRIA1P42261 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
GRIA1P42261 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.75■□□□□ 0.59
GRIA1P42261 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
GRIA1P42261 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.75■□□□□ 0.59
GRIA1P42261 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.75■□□□□ 0.59
GRIA1P42261 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
GRIA1P42261 AL355075.4-201ENST00000554988 638 ntBASIC18.75■□□□□ 0.59
GRIA1P42261 MIR3180-5-201ENST00000583743 153 ntBASIC18.75■□□□□ 0.59
GRIA1P42261 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.75■□□□□ 0.59
GRIA1P42261 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GRIA1P42261 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.75■□□□□ 0.59
GRIA1P42261 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GRIA1P42261 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
GRIA1P42261 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GRIA1P42261 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.75■□□□□ 0.59
GRIA1P42261 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
GRIA1P42261 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.75■□□□□ 0.59
GRIA1P42261 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GRIA1P42261 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GRIA1P42261 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
GRIA1P42261 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms