Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
GDNFP39905 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDNFP39905 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GDNFP39905 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
GDNFP39905 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
GDNFP39905 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDNFP39905 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GDNFP39905 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.13■□□□□ 0.17
GDNFP39905 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
GDNFP39905 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.13■□□□□ 0.17
GDNFP39905 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDNFP39905 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.13■□□□□ 0.17
GDNFP39905 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDNFP39905 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
GDNFP39905 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
GDNFP39905 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.13■□□□□ 0.17
GDNFP39905 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
GDNFP39905 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GDNFP39905 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDNFP39905 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDNFP39905 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDNFP39905 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDNFP39905 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.13■□□□□ 0.17
GDNFP39905 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
GDNFP39905 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
GDNFP39905 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
GDNFP39905 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDNFP39905 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
GDNFP39905 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDNFP39905 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDNFP39905 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDNFP39905 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDNFP39905 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
GDNFP39905 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDNFP39905 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDNFP39905 AC124067.4-201ENST00000519691 2379 ntBASIC16.12■□□□□ 0.17
GDNFP39905 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDNFP39905 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDNFP39905 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GDNFP39905 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GDNFP39905 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDNFP39905 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDNFP39905 ESRRAP1-201ENST00000400596 1257 ntBASIC16.12■□□□□ 0.17
GDNFP39905 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.12■□□□□ 0.17
GDNFP39905 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GDNFP39905 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.12■□□□□ 0.17
GDNFP39905 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.12■□□□□ 0.17
GDNFP39905 CD99P1-205ENST00000527459 561 ntBASIC16.12■□□□□ 0.17
GDNFP39905 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.12■□□□□ 0.17
GDNFP39905 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.12■□□□□ 0.17
GDNFP39905 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDNFP39905 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDNFP39905 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.12■□□□□ 0.17
GDNFP39905 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDNFP39905 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDNFP39905 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
GDNFP39905 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDNFP39905 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GDNFP39905 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDNFP39905 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDNFP39905 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDNFP39905 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
GDNFP39905 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDNFP39905 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDNFP39905 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.12■□□□□ 0.17
GDNFP39905 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
GDNFP39905 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.11■□□□□ 0.17
GDNFP39905 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
GDNFP39905 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDNFP39905 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GDNFP39905 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.11■□□□□ 0.17
GDNFP39905 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.11■□□□□ 0.17
GDNFP39905 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
GDNFP39905 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GDNFP39905 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GDNFP39905 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.11■□□□□ 0.17
GDNFP39905 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
GDNFP39905 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
GDNFP39905 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GDNFP39905 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GDNFP39905 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDNFP39905 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDNFP39905 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
GDNFP39905 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GDNFP39905 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.11■□□□□ 0.17
GDNFP39905 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDNFP39905 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDNFP39905 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDNFP39905 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.11■□□□□ 0.17
GDNFP39905 AL121829.2-201ENST00000620908 328 ntBASIC16.11■□□□□ 0.17
GDNFP39905 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDNFP39905 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDNFP39905 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.11■□□□□ 0.17
GDNFP39905 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDNFP39905 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
GDNFP39905 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GDNFP39905 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.11■□□□□ 0.17
GDNFP39905 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDNFP39905 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDNFP39905 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms