Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL8A2P25067 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL8A2P25067 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL8A2P25067 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL8A2P25067 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.63■□□□□ 0.09
COL8A2P25067 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
COL8A2P25067 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL8A2P25067 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL8A2P25067 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
COL8A2P25067 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL8A2P25067 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL8A2P25067 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL8A2P25067 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.63■□□□□ 0.09
COL8A2P25067 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL8A2P25067 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL8A2P25067 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL8A2P25067 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL8A2P25067 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.63■□□□□ 0.09
COL8A2P25067 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.63■□□□□ 0.09
COL8A2P25067 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.63■□□□□ 0.09
COL8A2P25067 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
COL8A2P25067 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL8A2P25067 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL8A2P25067 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.63■□□□□ 0.09
COL8A2P25067 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL8A2P25067 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
COL8A2P25067 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL8A2P25067 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL8A2P25067 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL8A2P25067 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.62■□□□□ 0.09
COL8A2P25067 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
COL8A2P25067 Z98044.1-201ENST00000632503 1764 ntBASIC15.62■□□□□ 0.09
COL8A2P25067 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL8A2P25067 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL8A2P25067 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
COL8A2P25067 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL8A2P25067 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
COL8A2P25067 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.62■□□□□ 0.09
COL8A2P25067 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
COL8A2P25067 AL645929.1-201ENST00000420084 975 ntBASIC15.62■□□□□ 0.09
COL8A2P25067 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.62■□□□□ 0.09
COL8A2P25067 HLA-F-220ENST00000434407 884 ntBASIC15.62■□□□□ 0.09
COL8A2P25067 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.62■□□□□ 0.09
COL8A2P25067 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.62■□□□□ 0.09
COL8A2P25067 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.62■□□□□ 0.09
COL8A2P25067 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.62■□□□□ 0.09
COL8A2P25067 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.62■□□□□ 0.09
COL8A2P25067 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.62■□□□□ 0.09
COL8A2P25067 AL136038.4-201ENST00000603606 1261 ntBASIC15.62■□□□□ 0.09
COL8A2P25067 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL8A2P25067 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
COL8A2P25067 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL8A2P25067 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL8A2P25067 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL8A2P25067 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
COL8A2P25067 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.62■□□□□ 0.09
COL8A2P25067 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.62■□□□□ 0.09
COL8A2P25067 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.62■□□□□ 0.09
COL8A2P25067 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL8A2P25067 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COL8A2P25067 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
COL8A2P25067 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL8A2P25067 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL8A2P25067 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL8A2P25067 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL8A2P25067 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.61■□□□□ 0.09
COL8A2P25067 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL8A2P25067 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COL8A2P25067 AC007613.1-201ENST00000572811 2597 ntBASIC15.61■□□□□ 0.09
COL8A2P25067 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL8A2P25067 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
COL8A2P25067 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL8A2P25067 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL8A2P25067 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.61■□□□□ 0.09
COL8A2P25067 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.61■□□□□ 0.09
COL8A2P25067 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.61■□□□□ 0.09
COL8A2P25067 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
COL8A2P25067 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.61■□□□□ 0.09
COL8A2P25067 AC069148.1-201ENST00000608741 768 ntBASIC15.61■□□□□ 0.09
COL8A2P25067 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.61■□□□□ 0.09
COL8A2P25067 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.61■□□□□ 0.09
COL8A2P25067 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COL8A2P25067 MTMR9LP-203ENST00000426597 1545 ntBASIC15.61■□□□□ 0.09
COL8A2P25067 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.61■□□□□ 0.09
COL8A2P25067 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
COL8A2P25067 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL8A2P25067 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL8A2P25067 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL8A2P25067 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL8A2P25067 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL8A2P25067 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COL8A2P25067 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL8A2P25067 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL8A2P25067 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL8A2P25067 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
COL8A2P25067 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL8A2P25067 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COL8A2P25067 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL8A2P25067 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.6■□□□□ 0.09
COL8A2P25067 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms