Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.69■□□□□ 0.58
HLA-DPA1P20036 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 AC009113.1-201ENST00000570267 2443 ntBASIC18.68■□□□□ 0.58
HLA-DPA1P20036 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPA1P20036 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 AC112497.1-201ENST00000624824 639 ntBASIC18.67■□□□□ 0.58
HLA-DPA1P20036 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPA1P20036 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DPA1P20036 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DPA1P20036 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DPA1P20036 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DPA1P20036 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DPA1P20036 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DPA1P20036 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DPA1P20036 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.66■□□□□ 0.58
HLA-DPA1P20036 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DPA1P20036 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DPA1P20036 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DPA1P20036 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DPA1P20036 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DPA1P20036 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DPA1P20036 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.66■□□□□ 0.58
HLA-DPA1P20036 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.66■□□□□ 0.58
HLA-DPA1P20036 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DPA1P20036 NEK4P2-201ENST00000580004 1012 ntBASIC18.66■□□□□ 0.58
HLA-DPA1P20036 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
HLA-DPA1P20036 AC133561.5-201ENST00000635547 218 ntBASIC18.66■□□□□ 0.58
HLA-DPA1P20036 AC097493.4-201ENST00000641197 219 ntBASIC18.66■□□□□ 0.58
HLA-DPA1P20036 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DPA1P20036 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DPA1P20036 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DPA1P20036 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DPA1P20036 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.66■□□□□ 0.58
HLA-DPA1P20036 AC104581.1-202ENST00000635932 2618 ntBASIC18.66■□□□□ 0.58
HLA-DPA1P20036 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DPA1P20036 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DPA1P20036 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms