Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC2P18074 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC2P18074 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.05■□□□□ 0.64
ERCC2P18074 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.05■□□□□ 0.64
ERCC2P18074 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.05■□□□□ 0.64
ERCC2P18074 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC2P18074 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC2P18074 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC2P18074 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC2P18074 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ERCC2P18074 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.05■□□□□ 0.64
ERCC2P18074 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ERCC2P18074 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC2P18074 AL163051.1-201ENST00000569214 1512 ntBASIC19.05■□□□□ 0.64
ERCC2P18074 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC2P18074 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC2P18074 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC2P18074 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.04■□□□□ 0.64
ERCC2P18074 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.04■□□□□ 0.64
ERCC2P18074 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
ERCC2P18074 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC2P18074 TERF1P1-201ENST00000311003 1181 ntBASIC19.04■□□□□ 0.64
ERCC2P18074 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC2P18074 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC2P18074 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC2P18074 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ERCC2P18074 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.04■□□□□ 0.64
ERCC2P18074 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC2P18074 AL137013.1-201ENST00000432946 1228 ntBASIC19.04■□□□□ 0.64
ERCC2P18074 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC2P18074 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC2P18074 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC2P18074 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC2P18074 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC2P18074 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC2P18074 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
ERCC2P18074 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC2P18074 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.04■□□□□ 0.64
ERCC2P18074 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.04■□□□□ 0.64
ERCC2P18074 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC2P18074 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC2P18074 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
ERCC2P18074 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.04■□□□□ 0.64
ERCC2P18074 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.04■□□□□ 0.64
ERCC2P18074 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.04■□□□□ 0.64
ERCC2P18074 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC2P18074 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC2P18074 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC2P18074 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC2P18074 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.04■□□□□ 0.64
ERCC2P18074 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.03■□□□□ 0.64
ERCC2P18074 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.03■□□□□ 0.64
ERCC2P18074 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.03■□□□□ 0.64
ERCC2P18074 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC2P18074 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
ERCC2P18074 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.03■□□□□ 0.64
ERCC2P18074 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ERCC2P18074 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC2P18074 AC073508.3-201ENST00000619697 1419 ntBASIC19.03■□□□□ 0.64
ERCC2P18074 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC2P18074 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC2P18074 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
ERCC2P18074 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC2P18074 AC005521.1-201ENST00000393351 872 ntBASIC19.03■□□□□ 0.64
ERCC2P18074 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.03■□□□□ 0.64
ERCC2P18074 ATP5G1P1-201ENST00000448724 379 ntBASIC19.03■□□□□ 0.64
ERCC2P18074 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ERCC2P18074 SEC1P-202ENST00000473944 940 ntBASIC19.03■□□□□ 0.64
ERCC2P18074 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.03■□□□□ 0.64
ERCC2P18074 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.03■□□□□ 0.64
ERCC2P18074 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.03■□□□□ 0.64
ERCC2P18074 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ERCC2P18074 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC2P18074 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.03■□□□□ 0.64
ERCC2P18074 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.03■□□□□ 0.64
ERCC2P18074 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.03■□□□□ 0.64
ERCC2P18074 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC2P18074 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.03■□□□□ 0.64
ERCC2P18074 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC2P18074 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.03■□□□□ 0.64
ERCC2P18074 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.03■□□□□ 0.64
ERCC2P18074 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC2P18074 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC2P18074 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.03■□□□□ 0.64
ERCC2P18074 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.03■□□□□ 0.64
ERCC2P18074 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.03■□□□□ 0.64
ERCC2P18074 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.03■□□□□ 0.64
ERCC2P18074 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.03■□□□□ 0.64
ERCC2P18074 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.03■□□□□ 0.64
ERCC2P18074 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC2P18074 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC2P18074 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.03■□□□□ 0.64
ERCC2P18074 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.03■□□□□ 0.64
ERCC2P18074 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ERCC2P18074 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.02■□□□□ 0.64
ERCC2P18074 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ERCC2P18074 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
ERCC2P18074 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.02■□□□□ 0.64
ERCC2P18074 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ERCC2P18074 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms