Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL11A1P12107 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.99■□□□□ 0.95
COL11A1P12107 AC005082.1-201ENST00000413042 2259 ntBASIC20.99■□□□□ 0.95
COL11A1P12107 AC116562.4-201ENST00000641316 2276 ntBASIC20.99■□□□□ 0.95
COL11A1P12107 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL11A1P12107 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL11A1P12107 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL11A1P12107 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.99■□□□□ 0.95
COL11A1P12107 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.99■□□□□ 0.95
COL11A1P12107 AC011840.4-201ENST00000578471 627 ntBASIC20.99■□□□□ 0.95
COL11A1P12107 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.99■□□□□ 0.95
COL11A1P12107 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.99■□□□□ 0.95
COL11A1P12107 AL773604.1-201ENST00000617417 272 ntBASIC20.99■□□□□ 0.95
COL11A1P12107 AC083906.6-201ENST00000641366 219 ntBASIC20.99■□□□□ 0.95
COL11A1P12107 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL11A1P12107 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL11A1P12107 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.99■□□□□ 0.95
COL11A1P12107 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL11A1P12107 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
COL11A1P12107 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL11A1P12107 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL11A1P12107 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
COL11A1P12107 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.99■□□□□ 0.95
COL11A1P12107 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL11A1P12107 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL11A1P12107 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL11A1P12107 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
COL11A1P12107 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
COL11A1P12107 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.99■□□□□ 0.95
COL11A1P12107 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.99■□□□□ 0.95
COL11A1P12107 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL11A1P12107 SDHAP2-201ENST00000455183 2001 ntBASIC20.99■□□□□ 0.95
COL11A1P12107 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL11A1P12107 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.98■□□□□ 0.95
COL11A1P12107 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL11A1P12107 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
COL11A1P12107 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL11A1P12107 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.98■□□□□ 0.95
COL11A1P12107 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL11A1P12107 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.98■□□□□ 0.95
COL11A1P12107 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL11A1P12107 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.98■□□□□ 0.95
COL11A1P12107 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL11A1P12107 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.98■□□□□ 0.95
COL11A1P12107 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.98■□□□□ 0.95
COL11A1P12107 AL138831.2-201ENST00000606564 490 ntBASIC20.98■□□□□ 0.95
COL11A1P12107 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL11A1P12107 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL11A1P12107 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.98■□□□□ 0.95
COL11A1P12107 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.98■□□□□ 0.95
COL11A1P12107 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.98■□□□□ 0.95
COL11A1P12107 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL11A1P12107 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL11A1P12107 AC009102.3-201ENST00000623118 1491 ntBASIC20.97■□□□□ 0.95
COL11A1P12107 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.97■□□□□ 0.95
COL11A1P12107 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL11A1P12107 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
COL11A1P12107 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL11A1P12107 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.97■□□□□ 0.95
COL11A1P12107 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.97■□□□□ 0.95
COL11A1P12107 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL11A1P12107 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL11A1P12107 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL11A1P12107 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL11A1P12107 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL11A1P12107 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL11A1P12107 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
COL11A1P12107 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.97■□□□□ 0.95
COL11A1P12107 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL11A1P12107 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL11A1P12107 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL11A1P12107 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.97■□□□□ 0.95
COL11A1P12107 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL11A1P12107 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.97■□□□□ 0.95
COL11A1P12107 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.97■□□□□ 0.95
COL11A1P12107 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.97■□□□□ 0.95
COL11A1P12107 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL11A1P12107 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL11A1P12107 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL11A1P12107 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL11A1P12107 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL11A1P12107 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
COL11A1P12107 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.96■□□□□ 0.95
COL11A1P12107 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.96■□□□□ 0.95
COL11A1P12107 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.96■□□□□ 0.95
COL11A1P12107 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.96■□□□□ 0.95
COL11A1P12107 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.96■□□□□ 0.95
COL11A1P12107 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.96■□□□□ 0.95
COL11A1P12107 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.96■□□□□ 0.95
COL11A1P12107 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL11A1P12107 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL11A1P12107 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL11A1P12107 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.95■□□□□ 0.94
COL11A1P12107 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL11A1P12107 AL662844.1-201ENST00000546340 181 ntBASIC20.95■□□□□ 0.94
COL11A1P12107 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.95■□□□□ 0.94
COL11A1P12107 IGHV3-41-201ENST00000613121 348 ntBASIC20.95■□□□□ 0.94
COL11A1P12107 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.95■□□□□ 0.94
COL11A1P12107 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
COL11A1P12107 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms