Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
TOP1P11387 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.75■■□□□ 1.07
TOP1P11387 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TOP1P11387 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
TOP1P11387 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TOP1P11387 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TOP1P11387 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TOP1P11387 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TOP1P11387 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TOP1P11387 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.74■■□□□ 1.07
TOP1P11387 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.74■■□□□ 1.07
TOP1P11387 AC010240.3-201ENST00000607688 395 ntBASIC21.74■■□□□ 1.07
TOP1P11387 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TOP1P11387 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.74■■□□□ 1.07
TOP1P11387 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.74■■□□□ 1.07
TOP1P11387 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TOP1P11387 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.74■■□□□ 1.07
TOP1P11387 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.74■■□□□ 1.07
TOP1P11387 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
TOP1P11387 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TOP1P11387 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TOP1P11387 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TOP1P11387 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TOP1P11387 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TOP1P11387 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TOP1P11387 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.73■■□□□ 1.07
TOP1P11387 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TOP1P11387 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TOP1P11387 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TOP1P11387 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
TOP1P11387 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TOP1P11387 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
TOP1P11387 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TOP1P11387 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TOP1P11387 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.73■■□□□ 1.07
TOP1P11387 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.73■■□□□ 1.07
TOP1P11387 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TOP1P11387 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
TOP1P11387 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.73■■□□□ 1.07
TOP1P11387 KRT18P41-201ENST00000518924 1277 ntBASIC21.73■■□□□ 1.07
TOP1P11387 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
TOP1P11387 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.73■■□□□ 1.07
TOP1P11387 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.73■■□□□ 1.07
TOP1P11387 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TOP1P11387 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.73■■□□□ 1.07
TOP1P11387 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.73■■□□□ 1.07
TOP1P11387 AC083849.1-201ENST00000615227 514 ntBASIC21.73■■□□□ 1.07
TOP1P11387 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TOP1P11387 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TOP1P11387 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.73■■□□□ 1.07
TOP1P11387 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TOP1P11387 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.73■■□□□ 1.07
TOP1P11387 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TOP1P11387 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TOP1P11387 LINC01311-201ENST00000565162 1445 ntBASIC21.72■■□□□ 1.07
TOP1P11387 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TOP1P11387 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.72■■□□□ 1.07
TOP1P11387 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TOP1P11387 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TOP1P11387 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
TOP1P11387 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TOP1P11387 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.72■■□□□ 1.07
TOP1P11387 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TOP1P11387 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TOP1P11387 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TOP1P11387 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.72■■□□□ 1.07
TOP1P11387 AC092597.1-201ENST00000487352 616 ntBASIC21.72■■□□□ 1.07
TOP1P11387 FAM86EP-206ENST00000510506 987 ntBASIC21.72■■□□□ 1.07
TOP1P11387 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.72■■□□□ 1.07
TOP1P11387 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
TOP1P11387 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TOP1P11387 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TOP1P11387 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.72■■□□□ 1.07
TOP1P11387 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.72■■□□□ 1.07
TOP1P11387 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TOP1P11387 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TOP1P11387 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
TOP1P11387 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TOP1P11387 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.72■■□□□ 1.07
TOP1P11387 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TOP1P11387 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TOP1P11387 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TOP1P11387 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TOP1P11387 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TOP1P11387 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TOP1P11387 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.71■■□□□ 1.07
TOP1P11387 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TOP1P11387 HBZP1-201ENST00000354915 429 ntBASIC21.71■■□□□ 1.07
TOP1P11387 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TOP1P11387 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.71■■□□□ 1.07
TOP1P11387 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.71■■□□□ 1.07
TOP1P11387 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TOP1P11387 ZNF444P1-201ENST00000559497 298 ntBASIC21.71■■□□□ 1.07
TOP1P11387 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.71■■□□□ 1.07
TOP1P11387 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.71■■□□□ 1.07
TOP1P11387 AL358472.4-201ENST00000633140 710 ntBASIC21.71■■□□□ 1.07
TOP1P11387 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.71■■□□□ 1.07
TOP1P11387 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TOP1P11387 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TOP1P11387 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms